RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SGMS2Q8NHU3 365 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 DYRK2Q92630 601 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 DGCR14Q96DF8 476 aaKnown RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 SNX22Q96L94 193 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 CITED2Q99967 270 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 ALG8Q9BVK2 526 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 FAM234AQ9H0X4 552 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 SLITRK2Q9H156 845 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 MEGF9Q9H1U4 602 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 PLEKHA1Q9HB21 404 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 FGF20Q9NP95 211 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 HHLA2Q9UM44 414 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 RPL36Q9Y3U8 105 aaKnown RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 IGKV1-12A0A0C4DH73 117 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 MEIOCA2RUB1 952 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 C17orf98A8MV24 154 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 DENRO43583 198 aaKnown RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 SPRY1O43609 319 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 GPR137BO60478 399 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 ZFPL1O95159 310 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 NDUFA7O95182 113 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 CLIC3O95833 236 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 IGKV1D-12P01611 117 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 MT-ND2P03891 347 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 LIMS3P0CW19 117 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 LIMS4P0CW20 117 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 BCL3P20749 454 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 AZGP1P25311 298 aaKnown RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 DUSP1P28562 367 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 SAA4P35542 130 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 HOXA1P49639 335 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 KRTAP10-3P60369 221 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 ADARB1P78563 741 aaKnown RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 SRSF4Q08170 494 aaKnown RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 ACSM1Q08AH1 577 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 RAB40BQ12829 278 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF273Q14593 569 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 CNN3Q15417 329 aaKnown RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 C21orf62-AS1Q17RA5 79 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 LRRC36Q1X8D7 754 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF674Q2M3X9 581 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 FOXB2Q5VYV0 432 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 NCR3LG1Q68D85 454 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 FAM58AQ8N1B3 248 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF676Q8N7Q3 588 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 OR52N1Q8NH53 320 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 LINC01006Q8NI28 216 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 MRPL48Q96GC5 212 aaKnown RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 SPACA5Q96QH8 159 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 ATP6V0BQ99437 205 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 PDCD1LG2Q9BQ51 273 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 DPAGT1Q9H3H5 408 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 HEXA-AS1Q9H8Q6 139 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 SMPD3Q9NY59 655 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-215ENST00000519474 ZNRD1Q9P1U0 126 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 IL36RNQ9UBH0 155 aa7.61□□□□□ -1.19
HDAC3-215ENST00000519474 LOC100506127A0A0U1RQW1 187 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 A0A1B0GUS0 222 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 CLPSL1A2RUU4 121 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 FAM90A8PA6NJQ4 464 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 H0YJX3 145 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 WRBO00258 174 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 OGG1O15527 345 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ANGPTL7O43827 346 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 PSPNO60542 156 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 FBP1P09467 338 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF20P17024 532 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 LMO1P25800 156 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 PAX6P26367 422 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 GBX2P52951 348 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-215ENST00000519474 SPCS3P61009 180 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 RPL15P61313 204 aaKnown RBP7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ACTA2P62736 377 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ACTG2P63267 376 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 DYRK1AQ13627 763 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF146Q15072 292 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 C2orf76Q3KRA6 126 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 MIDNQ504T8 468 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF691Q5VV52 312 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 OLFML2AQ68BL7 652 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 XAF1Q6GPH4 301 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 Q6ZSV7 163 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 LHFPL2Q6ZUX7 228 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 TPRA1Q86W33 373 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 SERPINA12Q8IW75 414 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 PARP16Q8N5Y8 322 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ZSCAN4Q8NAM6 433 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-215ENST00000519474 BEND2Q8NDZ0 799 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF555Q8NEP9 628 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 OR4S1Q8NGB4 309 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 OR5D14Q8NGL3 314 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 OR13C3Q8NGS6 347 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 OR4F5Q8NH21 305 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 PIFOQ8TCI5 191 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 EMG1Q92979 244 aaKnown RBP7.6□□□□□ -1.19
HDAC3-215ENST00000519474 RFT1Q96AA3 541 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 RDH12Q96NR8 316 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 SPXQ9BT56 116 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 JAM3Q9BX67 310 aa7.6□□□□□ -1.19
HDAC3-215ENST00000519474 ZCCHC4Q9H5U6 513 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms