RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 LPCAT4Q643R3 524 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF544Q6NX49 715 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 PAMR1Q6UXH9 720 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 UNQ6126/PRO20091Q6UXV3 157 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 FOXL2NBQ6ZUU3 175 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF367Q7RTV3 350 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 AKAP14Q86UN6 197 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MED12LQ86YW9 2145 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 TGIF2LXQ8IUE1 241 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF584Q8IVC4 421 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MUC15Q8N387 334 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF786Q8N393 782 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF555Q8NEP9 628 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SLC26A10Q8NG04 563 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 OR1J1Q8NGS3 322 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 OR6N2Q8NGY6 317 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 OR1F12Q8NHA8 337 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 NANPQ8TBE9 248 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 TMEM163Q8TC26 289 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 THEM6Q8WUY1 208 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNRF4Q8WWF5 429 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CYGBQ8WWM9 190 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 TMEM37Q8WXS4 190 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SLC7A6Q92536 515 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SPTSSAQ969W0 71 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 C4orf45Q96LM5 186 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 Q96MF0 132 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 TEAD3Q99594 435 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 DHRS9Q9BPW9 319 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 AIFM2Q9BRQ8 373 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 COPS4Q9BT78 406 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 WACQ9BTA9 647 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 NDUFAF3Q9BU61 184 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 RACGAP1Q9H0H5 632 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 VCXQ9H320 206 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 RANBP3Q9H6Z4 567 aaPredicted RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 SLC25A19Q9HC21 320 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CA10Q9NS85 328 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SERTAD4Q9NUC0 356 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 AURKAIP1Q9NWT8 199 aaPredicted RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 GNG12Q9UBI6 72 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MRM2Q9UI43 246 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 DIMT1Q9UNQ2 313 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 GMPPBQ9Y5P6 360 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 LHFPL6Q9Y693 200 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CSMD1Q96PZ7 3565 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 POLQO75417 2590 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MAP1AP78559 2803 aaPredicted RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 LOC105371267A0A1B0GV96 52 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 A0A1W2PPE3 182 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 OR6C6A6NF89 314 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 FABP12A6NFH5 140 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 LRRC30A6NM36 301 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SRRM4A7MD48 611 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 FAM90A26D6RGX4 464 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MPPED1O15442 326 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 AIREO43918 545 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 GMDSO60547 372 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SNAP29O95721 258 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 NGFP01138 241 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CD8AP01732 235 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ADRA2AP08913 450 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 H2BFMP0C1H6 154 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF35P13682 527 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 IRF2P14316 349 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 GP9P14770 177 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 HSD11B1P28845 292 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 OTX1P32242 354 aaPredicted RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 GLRXP35754 106 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 GGT2P36268 569 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 GPR12P47775 334 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 PTH2RP49190 550 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 PRKXP51817 358 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 HCCSP53701 268 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 KLF3P57682 345 aaPredicted RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 ERVS71-1P61550 626 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 RPS23P62266 143 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 SNRPD2P62316 118 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 LCN2P80188 198 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ECH1Q13011 328 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 HNF4GQ14541 408 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 RGS21Q2M5E4 152 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF718Q3SXZ3 478 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ARMCX4Q5H9R4 360 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SLC35D3Q5M8T2 416 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 LY6G6FQ5SQ64 297 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 C12orf73Q69YU5 71 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SLC18B1Q6NT16 456 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 FAM71F2Q6NXP2 309 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SHFQ7M4L6 423 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 GPR141Q7Z602 305 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 LRP11Q86VZ4 500 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 COMMD2Q86X83 199 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 GID4Q8IVV7 300 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MMD2Q8IY49 270 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF101Q8IZC7 436 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF283Q8N7M2 679 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 NUP37Q8NFH4 326 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SYNPRQ8TBG9 265 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms