RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 RDH5Q92781 318 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 TAMM41Q96BW9 452 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 TMA16Q96EY4 203 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 TIMM17AQ99595 171 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 NIPSNAP1Q9BPW8 284 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 DEFB126Q9BYW3 111 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 TRABDQ9H4I3 376 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 INIPQ9NRY2 104 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 TAS2R5Q9NYW4 299 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 DKKL1Q9UK85 242 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 PBRM1Q86U86 1689 aa4.05□□□□□ -1.76
CTNNA1-202ENST00000517533 PDS5BQ9NTI5 1447 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 ROCK1Q13464 1354 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 CHD4Q14839 1912 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 LOC389332A0A1B0GUA5 103 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 KRBOX1C9JBD0 128 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 UPK1AO00322 258 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 CHP2O43745 196 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 CD5LO43866 347 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 ARL6IP5O75915 188 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 MT-ND4P03905 459 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 RNF224P0DH78 156 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 HTR1EP28566 365 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 MIPP30301 263 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 SLC18A1P54219 525 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 RAB25P57735 213 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 GINS1Q14691 196 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 C16orf72Q14CZ0 275 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 HIST3H3Q16695 136 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 Q1RN00 199 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 TCTEX1D4Q5JR98 221 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 TMEM205Q6UW68 189 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 SMIM15Q7Z3B0 74 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 NAA40Q86UY6 237 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 ITPRIPQ8IWB1 547 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 TMEM86BQ8N661 226 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 ZNF645Q8N7E2 425 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 OR10D3Q8NH80 312 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 OR2V1Q8NHB1 315 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 ZNF420Q8TAQ5 688 aaPredicted RBP4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 FAM104AQ969W3 186 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 C1orf147Q96MC9 270 aaPredicted RBP4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 OR52B2Q96RD2 323 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 PHB2Q99623 299 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 PRSS27Q9BQR3 290 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 ZNF391Q9UJN7 358 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 VPREB3Q9UKI3 123 aa4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 C14orf166Q9Y224 244 aaKnown RBP4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 KLF13Q9Y2Y9 288 aaPredicted RBP4.04□□□□□ -1.76
CTNNA1-202ENST00000517533 C2orf16Q68DN1 1984 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 SMARCA4P51532 1647 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 TRAV8-3A0A0A6YYJ7 113 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 IGHV3-74A0A0B4J1X5 117 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 PGPA6NDG6 321 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 EPOPA6NHQ4 379 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 ARGFXA6NJG6 315 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 UPK2O00526 184 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 IGLV2-8P01709 118 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 HLA-DPB1P04440 258 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 CST2P09228 141 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 LINC00614P0C842 121 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 P0C879 139 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 MYL12AP19105 171 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 CFL1P23528 166 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 MSNP26038 577 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 IL3RAP26951 378 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 C1QTNF8P60827 252 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 SPCS3P61009 180 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 GRB2P62993 217 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 SLC35A2P78381 396 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 RPL19P84098 196 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 IFITM2Q01629 132 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 PNOCQ13519 176 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 C1DQ13901 141 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 PTGES3Q15185 160 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 ZNF404Q494X3 552 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 RSBN1Q5VWQ0 802 aaPredicted RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 TMEM215Q68D42 235 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 GSG1LQ6UXU4 331 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 Q6ZSR6 202 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 CLEC20AQ6ZU45 233 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 GALNT10Q86SR1 603 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 Q8WTZ3 238 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 YIPF5Q969M3 257 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 SNF8Q96H20 258 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 TMEM101Q96IK0 257 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 MRPL20Q9BYC9 149 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 ZNF223Q9UK11 482 aaPredicted RBP4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 POLR1DQ9Y2S0 133 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 INSIG2Q9Y5U4 225 aa4.03□□□□□ -1.76
CTNNA1-202ENST00000517533 CAMSAP1Q5T5Y3 1602 aa4.03□□□□□ -1.77
CTNNA1-202ENST00000517533 GNG14A0A1W2PPG7 69 aa4.02□□□□□ -1.77
CTNNA1-202ENST00000517533 MYBPHLA2RUH7 354 aa4.02□□□□□ -1.77
CTNNA1-202ENST00000517533 ZNF705GA8MUZ8 300 aaPredicted RBP4.02□□□□□ -1.77
CTNNA1-202ENST00000517533 KLLNB2CW77 178 aa4.02□□□□□ -1.77
CTNNA1-202ENST00000517533 DISC1C4P0D8 188 aa4.02□□□□□ -1.77
CTNNA1-202ENST00000517533 TRIM49D1C9J1S8 452 aa4.02□□□□□ -1.77
CTNNA1-202ENST00000517533 KLRC4O43908 158 aa4.02□□□□□ -1.77
CTNNA1-202ENST00000517533 MMP23AO75900 390 aa4.02□□□□□ -1.77
CTNNA1-202ENST00000517533 HAND1O96004 215 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms