RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CD36P16671 472 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PRKACAP17612 351 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BCL3P20749 454 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GATA3P23771 443 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MPZP25189 248 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CALRP27797 417 aaKnown RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUSP1P28562 367 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PRDX2P32119 198 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PTGFRP43088 359 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SNU13P55769 128 aaKnown RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GNB2P62879 340 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FABP5Q01469 135 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SCN1BQ07699 218 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SMIM21Q3B7S5 101 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ESCO2Q56NI9 601 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GLT8D1Q68CQ7 371 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAHD2BQ6P2I3 314 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FIP1L1Q6UN15 594 aaKnown RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GLIPR1L1Q6UWM5 242 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 Q6ZRM9 215 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DCDC5Q6ZRR9 648 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SLC36A1Q7Z2H8 476 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 C1QL2Q7Z5L3 287 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IZUMO1Q8IYV9 350 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM58AQ8N1B3 248 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZSCAN4Q8NAM6 433 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 POC1AQ8NBT0 407 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SYT8Q8NBV8 401 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PHYHIPQ92561 330 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 EMG1Q92979 244 aaKnown RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 C12orf43Q96C57 262 aaKnown RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAHD2AQ96GK7 314 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NRIP2Q9BQI9 281 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SSBP3Q9BWW4 388 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 METTL9Q9H1A3 318 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF696Q9H7X3 374 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RBFOX1Q9NWB1 397 aaKnown RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CLN8Q9UBY8 286 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GLS2Q9UI32 602 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SSR3Q9UNL2 185 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GSTK1Q9Y2Q3 226 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 AK6Q9Y3D8 172 aaKnown RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ACANP16112 2415 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ABCA1O95477 2261 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A087X0M5 115 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IGKV1-12A0A0C4DH73 117 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LOC100506127A0A0U1RQW1 187 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A1B0GX30 115 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A1W2PPH5 198 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NKX6-3A6NJ46 265 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A8MV72 311 aaPredicted RBP4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DVL1O14640 695 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DEGS1O15121 323 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CD5LO43866 347 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF780AO75290 641 aaPredicted RBP4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SC5DO75845 299 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 KDM4BO94953 1096 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IGKV1D-12P01611 117 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SFTPBP07988 381 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CHRM2P08172 466 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 UCHL1P09936 223 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NDUFB7P17568 137 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CPT2P23786 658 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MYL9P24844 172 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZFP36P26651 326 aaKnown RBP4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR3A4PP47883 348 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PITPNBP48739 271 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CEBPDP49716 269 aaPredicted RBP4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PSMD7P51665 324 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CAPZA1P52907 286 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TIRAPP58753 221 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZP1P60852 638 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ERVK11-1P61568 191 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SEC61A1P61619 476 aaKnown RBP4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LCN2P80188 198 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SLC22A6Q4U2R8 563 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LRRC10Q5BKY1 277 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 WDR25Q64LD2 544 aaPredicted RBP4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 STUMQ69YW2 141 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 C22orf42Q6IC83 251 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DGAT2L7PQ6IED9 249 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CRIP3Q6Q6R5 217 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GLCCI1Q86VQ1 547 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 Q8IYB0 196 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SAXO1Q8IYX7 474 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CD177Q8N6Q3 437 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM216BQ8N7L0 139 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NKAIN3Q8N8D7 197 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNRF1Q8ND25 227 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TMEM185AQ8NFB2 350 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PXT1Q8NFP0 134 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR10K1Q8NGX5 313 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ANGPTL6Q8NI99 470 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TMEM186Q96B77 213 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MED30Q96HR3 178 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CHCHD6Q9BRQ6 235 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR51E2Q9H255 320 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MMP26Q9NRE1 261 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PCDHB16Q9NRJ7 776 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms