RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 OR5J2Q8NH18 312 aa-2.33□□□□□ -2.78
SNORA40.13-201ENST00000516379 TWIST2Q8WVJ9 160 aa-2.33□□□□□ -2.78
SNORA40.13-201ENST00000516379 C2orf40Q9H1Z8 148 aa-2.33□□□□□ -2.78
SNORA40.13-201ENST00000516379 ARV1Q9H2C2 271 aa-2.33□□□□□ -2.78
SNORA40.13-201ENST00000516379 VCX3BQ9H321 246 aa-2.33□□□□□ -2.78
SNORA40.13-201ENST00000516379 RHBDD3Q9Y3P4 386 aa-2.33□□□□□ -2.78
SNORA40.13-201ENST00000516379 LHFPL6Q9Y693 200 aa-2.33□□□□□ -2.78
SNORA40.13-201ENST00000516379 SETD5Q9C0A6 1442 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 SMARCA4P51532 1647 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 TMEM235A6NFC5 223 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 CLDN25C9JDP6 229 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 F8WDY8 70 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 CLDN11O75508 207 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 UGT2B4P06133 528 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 EVI2BP34910 448 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 FABP6P51161 128 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 SSX1Q16384 188 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 TAL2Q16559 108 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 HSP90B2PQ58FF3 399 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 RIPPLY2Q5TAB7 128 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 SLC22A24Q8N4F4 322 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 C9orf163Q8N9P6 203 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 OR2M3Q8NG83 312 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 RXFP2Q8WXD0 754 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 SPACA5Q96QH8 159 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 ATP5SQ99766 215 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 MRPL20Q9BYC9 149 aaKnown RBP-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 ACTR3CQ9C0K3 210 aaPredicted RBP-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 CISHQ9NSE2 258 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 HRASLS2Q9NWW9 162 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 FAM215AQ9Y5M1 114 aa-2.34□□□□□ -2.78
SNORA40.13-201ENST00000516379 EPPK1P58107 5090 aaKnown RBP-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 USP9YO00507 2555 aaPredicted RBP-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 IGHV3-73A0A0B4J1V6 119 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 M0R2N4 97 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 SCAMP2O15127 329 aaKnown RBP-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 PTBP3O95758 552 aaKnown RBP-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 CALCBP10092 127 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 RAB4AP20338 218 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 ATP5DP30049 168 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 SERPINB8P50452 374 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 ACTR3P61158 418 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 CLLU1OSQ5K130 101 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 LAIR2Q6ISS4 152 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 FAM173BQ6P4H8 233 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 PGLYRP3Q96LB9 341 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 QKIQ96PU8 341 aaKnown RBP eCLIP-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 UPK3BQ9BT76 320 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 STMN4Q9H169 189 aaPredicted RBP-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 KCNIP2Q9NS61 270 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 CHRNA9Q9UGM1 479 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 MTCH2Q9Y6C9 303 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 STARD9Q9P2P6 4700 aa-2.35□□□□□ -2.79
SNORA40.13-201ENST00000516379 COL4A5P29400 1685 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 LINC01619G3V211 115 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 NME4O00746 187 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 SYNGR1O43759 233 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 OR4A8P0C604 315 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 ZNF728P0DKX0 622 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 SPINT3P49223 89 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 EFL1Q7Z2Z2 1120 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 ATOH7Q8N100 152 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 FGF13Q92913 245 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 TBX5Q99593 518 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 NT5MQ9NPB1 228 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 TMEM100Q9NV29 134 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 RBM22Q9NW64 420 aaKnown RBP eCLIP-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 HHLA3Q9XRX5 114 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 PKHD1P08F94 4074 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 UBR4Q5T4S7 5183 aa-2.36□□□□□ -2.79
SNORA40.13-201ENST00000516379 EPG5Q9HCE0 2579 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 WDR19Q8NEZ3 1342 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 KIAA1109Q2LD37 5005 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 IGKV1-12A0A0C4DH73 117 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 M0R3G1 203 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 MAPK13O15264 365 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 SLC37A4O43826 429 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 LY6HO94772 140 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 IGKV1D-12P01611 117 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 SERPINA7P05543 415 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 S100A2P29034 98 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 TNNT3P45378 269 aaPredicted RBP-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 FOXA3P55318 350 aaPredicted RBP-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 CBX1P83916 185 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 IFFO1Q0D2I5 559 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 MMDQ15546 238 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 TGFBIQ15582 683 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 PSMD5Q16401 504 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 C2orf76Q3KRA6 126 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 CHCHD2P9Q5T1J5 151 aaPredicted RBP-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 SLC36A1Q7Z2H8 476 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 LINC00596Q86U02 117 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 MARCH3Q86UD3 253 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 LHFPL1Q86WI0 220 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 KRTCAP2Q8N6L1 136 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 TRIML2Q8N7C3 387 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 SDR9C7Q8NEX9 313 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 BORCS5Q969J3 196 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 CCDC126Q96EE4 140 aa-2.37□□□□□ -2.79
SNORA40.13-201ENST00000516379 CABS1Q96KC9 395 aa-2.37□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms