RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CDKN2AP42771 156 aaKnown RBP9.71□□□□□ -0.85
TRIM41-209ENST00000515834 FOXL2P58012 376 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 ZNF841Q6ZN19 808 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 NPAS1Q99742 590 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 GHITMQ9H3K2 345 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 SRD5A3Q9H8P0 318 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 CNTD2Q9H8S5 307 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 NIT2Q9NQR4 276 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 SMPD2O60906 423 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 PTBP3O95758 552 aaKnown RBP9.71□□□□□ -0.85
TRIM41-209ENST00000515834 PMELP40967 661 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 SLC25A1P53007 311 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 AESQ08117 197 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 IZUMO4Q1ZYL8 232 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 MIDNQ504T8 468 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 OR10G4Q8NGN3 311 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 OR10G9Q8NGN4 311 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 OR10G7Q8NGN6 311 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 MOGAT1Q96PD6 335 aa9.71□□□□□ -0.85
TRIM41-209ENST00000515834 CISD1Q9NZ45 108 aaKnown RBP9.71□□□□□ -0.85
TRIM41-209ENST00000515834 IGHV3-72A0A0B4J1Y9 119 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 HOXC4P09017 264 aaPredicted RBP9.71□□□□□ -0.86
TRIM41-209ENST00000515834 HIST1H3AP68431 136 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 GAB4Q2WGN9 574 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 MZB1Q8WU39 189 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 SSMEM1Q8WWF3 244 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 LURAP1Q96LR2 239 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 WDR13Q9H1Z4 485 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 CTLA4P16410 223 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 ACAA2P42765 397 aaKnown RBP9.71□□□□□ -0.86
TRIM41-209ENST00000515834 SLC23A3Q6PIS1 610 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 TBC1D26Q86UD7 250 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 EIF4E3Q8N5X7 224 aaKnown RBP9.71□□□□□ -0.86
TRIM41-209ENST00000515834 RAB40CQ96S21 281 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 UQCC2Q9BRT2 126 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 HIST1H1EP10412 219 aaKnown RBP9.71□□□□□ -0.86
TRIM41-209ENST00000515834 EVX1P49640 407 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 CCDC144NLQ6NUI1 221 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 TMEM88Q6PEY1 159 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 SCGB1D4Q6XE38 83 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 TMEM37Q8WXS4 190 aa9.71□□□□□ -0.86
TRIM41-209ENST00000515834 GMPPAQ96IJ6 420 aaPredicted RBP9.71□□□□□ -0.86
TRIM41-209ENST00000515834 SF3B6Q9Y3B4 125 aaKnown RBP9.71□□□□□ -0.86
TRIM41-209ENST00000515834 TRAV1-2A0A0B4J238 106 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 ZNF137PP52743 207 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 C16orf82Q7Z2V1 217 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 OR6X1Q8NH79 312 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 TIMP4Q99727 224 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 KCNK15Q9H427 330 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 TUBA4BQ9H853 241 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 TMED3Q9Y3Q3 217 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 SCN3AQ9NY46 2000 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 PGA3P0DJD8 388 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 COL10A1Q03692 680 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 CLEC9AQ6UXN8 241 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 MAP6Q96JE9 813 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 FGF20Q9NP95 211 aaPredicted RBP9.7□□□□□ -0.86
TRIM41-209ENST00000515834 PARD6AQ9NPB6 346 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 ADRB1P08588 477 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 WNT5AP41221 380 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 KIR3DL2P43630 455 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 RPL31P62899 125 aaKnown RBP9.7□□□□□ -0.86
TRIM41-209ENST00000515834 RSPO4Q2I0M5 234 aaPredicted RBP9.7□□□□□ -0.86
TRIM41-209ENST00000515834 LIAT1Q6ZQX7 453 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 DIRC2Q96SL1 478 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 GPR35Q9HC97 309 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 TRDCB7Z8K6 153 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 TCL1AP56279 114 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 C19orf54Q5BKX5 351 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 FAHD1Q6P587 224 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 NUBPLQ8TB37 319 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 PRR19A6NJB7 356 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 GEMIN2O14893 280 aaKnown RBP9.7□□□□□ -0.86
TRIM41-209ENST00000515834 ERVFRD-1P60508 538 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 PSG5Q15238 335 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 AMMECR1LQ6DCA0 310 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 ZG16BQ96DA0 208 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 GUCD1Q96NT3 240 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 ZMAT5Q9UDW3 170 aaKnown RBP9.7□□□□□ -0.86
TRIM41-209ENST00000515834 ITGB4P16144 1822 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 MAP1LC3B2A6NCE7 125 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 INSL4Q14641 139 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 CENPVQ7Z7K6 275 aaPredicted RBP9.7□□□□□ -0.86
TRIM41-209ENST00000515834 CARFQ8N187 725 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 OR4P4Q8NGL7 312 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 CCL13Q99616 98 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 MAP1LC3BQ9GZQ8 125 aa9.7□□□□□ -0.86
TRIM41-209ENST00000515834 MAST2Q6P0Q8 1798 aa9.69□□□□□ -0.86
TRIM41-209ENST00000515834 FCN1O00602 326 aa9.69□□□□□ -0.86
TRIM41-209ENST00000515834 RPL34P49207 117 aaKnown RBP9.69□□□□□ -0.86
TRIM41-209ENST00000515834 D2HGDHQ8N465 521 aa9.69□□□□□ -0.86
TRIM41-209ENST00000515834 ARRDC1Q8N5I2 433 aa9.69□□□□□ -0.86
TRIM41-209ENST00000515834 KLHDC1Q8N7A1 406 aa9.69□□□□□ -0.86
TRIM41-209ENST00000515834 C16orf92Q96LL3 132 aa9.69□□□□□ -0.86
TRIM41-209ENST00000515834 RTN4RQ9BZR6 473 aa9.69□□□□□ -0.86
TRIM41-209ENST00000515834 NAA60Q9H7X0 242 aa9.69□□□□□ -0.86
TRIM41-209ENST00000515834 ZNF275Q9NSD4 429 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms