RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 NHLRC3Q5JS37 347 aa21.34■■□□□ 1.01
DDR1-279ENST00000515529 NCR3LG1Q68D85 454 aa21.34■■□□□ 1.01
DDR1-279ENST00000515529 GHRLQ9UBU3 117 aa21.34■■□□□ 1.01
DDR1-279ENST00000515529 CENPVL3A0A0U1RRI6 287 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 HSPB6O14558 160 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 OR7C1O76099 320 aaPredicted RBP21.33■■□□□ 1.01
DDR1-279ENST00000515529 UBBP0CG47 229 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 P2RX3P56373 397 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 GUCA2AQ02747 115 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 ZNF273Q14593 569 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 BRD3OSQ6XYD6 125 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 TRAPPC6BQ86SZ2 158 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 PDZD9Q8IXQ8 264 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 Q8N7P7 452 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 TPRX1Q8N7U7 411 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 MRPS24Q96EL2 167 aaKnown RBP21.33■■□□□ 1.01
DDR1-279ENST00000515529 JMJD8Q96S16 334 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 PLGRKTQ9HBL7 147 aa21.33■■□□□ 1.01
DDR1-279ENST00000515529 A0A087WXM4 84 aa21.32■■□□□ 1
DDR1-279ENST00000515529 A0A0A6YYJ9 748 aa21.32■■□□□ 1
DDR1-279ENST00000515529 IGHV1-69DA0A0B4J2H0 117 aa21.32■■□□□ 1
DDR1-279ENST00000515529 TRDV1A0A1B0GX56 115 aa21.32■■□□□ 1
DDR1-279ENST00000515529 CRTAPO75718 401 aaPredicted RBP21.32■■□□□ 1
DDR1-279ENST00000515529 IGHV1-69P01742 117 aa21.32■■□□□ 1
DDR1-279ENST00000515529 MYL9P24844 172 aa21.32■■□□□ 1
DDR1-279ENST00000515529 ERP29P30040 261 aaKnown RBP21.32■■□□□ 1
DDR1-279ENST00000515529 TSPAN14Q8NG11 270 aa21.32■■□□□ 1
DDR1-279ENST00000515529 CST11Q9H112 138 aa21.32■■□□□ 1
DDR1-279ENST00000515529 ING3Q9NXR8 418 aa21.32■■□□□ 1
DDR1-279ENST00000515529 CSN2P05814 226 aa21.31■■□□□ 1
DDR1-279ENST00000515529 ZNF728P0DKX0 622 aa21.31■■□□□ 1
DDR1-279ENST00000515529 CCL3L1P16619 93 aa21.31■■□□□ 1
DDR1-279ENST00000515529 GALP22466 123 aa21.31■■□□□ 1
DDR1-279ENST00000515529 PRTN3P24158 256 aa21.31■■□□□ 1
DDR1-279ENST00000515529 HTR2CP28335 458 aa21.31■■□□□ 1
DDR1-279ENST00000515529 RANBP1P43487 201 aa21.31■■□□□ 1
DDR1-279ENST00000515529 ATXN7L3Q14CW9 347 aaPredicted RBP21.31■■□□□ 1
DDR1-279ENST00000515529 MPV17LQ2QL34 196 aa21.31■■□□□ 1
DDR1-279ENST00000515529 KRBOX4Q5JUW0 171 aa21.31■■□□□ 1
DDR1-279ENST00000515529 RUSC1-AS1Q66K80 236 aa21.31■■□□□ 1
DDR1-279ENST00000515529 METAP1DQ6UB28 335 aaPredicted RBP21.31■■□□□ 1
DDR1-279ENST00000515529 C9orf139Q6ZV77 190 aa21.31■■□□□ 1
DDR1-279ENST00000515529 USP43Q70EL4 1123 aa21.31■■□□□ 1
DDR1-279ENST00000515529 LYPD6Q86Y78 171 aa21.31■■□□□ 1
DDR1-279ENST00000515529 BCL6BQ8N143 479 aaPredicted RBP21.31■■□□□ 1
DDR1-279ENST00000515529 OR6M1Q8NGM8 313 aa21.31■■□□□ 1
DDR1-279ENST00000515529 ZNF714Q96N38 554 aa21.31■■□□□ 1
DDR1-279ENST00000515529 AK6Q9Y3D8 172 aaKnown RBP21.31■■□□□ 1
DDR1-279ENST00000515529 LINC00312Q9Y6C7 94 aa21.31■■□□□ 1
DDR1-279ENST00000515529 TRGV10A0A0A0MS01 117 aa21.3■■□□□ 1
DDR1-279ENST00000515529 A0A1W2PP11 408 aa21.3■■□□□ 1
DDR1-279ENST00000515529 MEX3AA1L020 520 aaKnown RBP21.3■■□□□ 1
DDR1-279ENST00000515529 PDCD5O14737 125 aa21.3■■□□□ 1
DDR1-279ENST00000515529 GEMIN2O14893 280 aaKnown RBP21.3■■□□□ 1
DDR1-279ENST00000515529 MGMTP16455 207 aa21.3■■□□□ 1
DDR1-279ENST00000515529 PSMD7P51665 324 aa21.3■■□□□ 1
DDR1-279ENST00000515529 AESQ08117 197 aa21.3■■□□□ 1
DDR1-279ENST00000515529 C1orf100Q5SVJ3 147 aa21.3■■□□□ 1
DDR1-279ENST00000515529 ATAD3CQ5T2N8 411 aa21.3■■□□□ 1
DDR1-279ENST00000515529 CD200R1LQ6Q8B3 271 aa21.3■■□□□ 1
DDR1-279ENST00000515529 SELENOIQ9C0D9 397 aa21.3■■□□□ 1
DDR1-279ENST00000515529 BANF2Q9H503 90 aa21.3■■□□□ 1
DDR1-279ENST00000515529 HEXA-AS1Q9H8Q6 139 aa21.3■■□□□ 1
DDR1-279ENST00000515529 UNKLQ9H9P5 680 aaKnown RBP21.3■■□□□ 1
DDR1-279ENST00000515529 TRAV24A0A0B4J272 114 aa21.29■■□□□ 1
DDR1-279ENST00000515529 KCNJ3P48549 501 aa21.29■■□□□ 1
DDR1-279ENST00000515529 ERVFRD-1P60508 538 aa21.29■■□□□ 1
DDR1-279ENST00000515529 TAF9Q16594 264 aa21.29■■□□□ 1
DDR1-279ENST00000515529 SYT6Q5T7P8 510 aaPredicted RBP21.29■■□□□ 1
DDR1-279ENST00000515529 SIGLECL1Q8N7X8 197 aa21.29■■□□□ 1
DDR1-279ENST00000515529 NEK7Q8TDX7 302 aa21.29■■□□□ 1
DDR1-279ENST00000515529 DPCDQ9BVM2 203 aaPredicted RBP21.29■■□□□ 1
DDR1-279ENST00000515529 BARHL1Q9BZE3 327 aa21.29■■□□□ 1
DDR1-279ENST00000515529 IFT22Q9H7X7 185 aa21.29■■□□□ 1
DDR1-279ENST00000515529 SPACA1Q9HBV2 294 aa21.29■■□□□ 1
DDR1-279ENST00000515529 STUB1Q9UNE7 303 aa21.29■■□□□ 1
DDR1-279ENST00000515529 SSR3Q9UNL2 185 aa21.29■■□□□ 1
DDR1-279ENST00000515529 MXRA5Q9NR99 2828 aa21.28■■□□□ 1
DDR1-279ENST00000515529 GLIPR1P48060 266 aa21.28■■□□□ 1
DDR1-279ENST00000515529 PRB3Q04118 309 aaPredicted RBP21.28■■□□□ 1
DDR1-279ENST00000515529 KLRD1Q13241 179 aa21.28■■□□□ 1
DDR1-279ENST00000515529 RAB11BQ15907 218 aa21.28■■□□□ 1
DDR1-279ENST00000515529 C22orf42Q6IC83 251 aa21.28■■□□□ 1
DDR1-279ENST00000515529 SUMF2Q8NBJ7 301 aa21.28■■□□□ 1
DDR1-279ENST00000515529 ZDHHC16Q969W1 377 aa21.28■■□□□ 1
DDR1-279ENST00000515529 FAM46BQ96A09 425 aa21.28■■□□□ 1
DDR1-279ENST00000515529 UBE2J1Q9Y385 318 aaPredicted RBP21.28■■□□□ 1
DDR1-279ENST00000515529 TRAV1-2A0A0B4J238 106 aa21.27■■□□□ 1
DDR1-279ENST00000515529 ODAMA1E959 279 aa21.27■■□□□ 1
DDR1-279ENST00000515529 RNASEK-C17orf49H0YIS7 233 aa21.27■■□□□ 1
DDR1-279ENST00000515529 H3BUI4 141 aa21.27■■□□□ 1
DDR1-279ENST00000515529 SLC22A1O15245 554 aa21.27■■□□□ 1
DDR1-279ENST00000515529 MPIG6BO95866 241 aa21.27■■□□□ 1
DDR1-279ENST00000515529 UBE2E1P51965 193 aa21.27■■□□□ 1
DDR1-279ENST00000515529 DLX1P56177 255 aa21.27■■□□□ 1
DDR1-279ENST00000515529 HILS1P60008 231 aa21.27■■□□□ 1
DDR1-279ENST00000515529 TMEM104Q8NE00 496 aa21.27■■□□□ 1
DDR1-279ENST00000515529 C1orf147Q96MC9 270 aaPredicted RBP21.27■■□□□ 1
DDR1-279ENST00000515529 GAL3ST2Q9H3Q3 398 aa21.27■■□□□ 1
DDR1-279ENST00000515529 ZNF696Q9H7X3 374 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms