RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 H3BP45 60 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 hCG_2039718K7EN88 272 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 PRTN3P24158 256 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 DNASE1L1P49184 302 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 DHRS2Q13268 280 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 Q6ZQT7 251 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 CPNE9Q8IYJ1 553 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 SPICQ8N5J4 248 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 OR8G5Q8NG78 346 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 TWIST2Q8WVJ9 160 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 ULBP1Q9BZM6 244 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 SLC25A31Q9H0C2 315 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 MCTS1Q9ULC4 181 aaKnown RBP2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 C14orf166Q9Y224 244 aaKnown RBP2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 U3KQK5 164 aa2.21□□□□□ -2.06
HMGCS1-207ENST00000514610 SPATA31E1Q6ZUB1 1445 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 PGPA6NDG6 321 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 SDHAF1A6NFY7 115 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 E7EQL1 145 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 C3orf84H3BNL1 204 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 M0QXV9 152 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 SHOX2O60902 331 aaPredicted RBP2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 HLA-AP01891 365 aaKnown RBP2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 GIMD1P0DJR0 217 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 SCGB1C2P0DMR2 95 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 GTF2F2P13984 249 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 GABRA1P14867 456 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 TTPAP49638 278 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 ZNF83P51522 516 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 PLTPP55058 493 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 DSTNP60981 165 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 Q6ZT83 130 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 Q8NAQ8 132 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 SCGB1C1Q8TD33 95 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 NELFBQ8WX92 580 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 SLC25A44Q96H78 314 aaPredicted RBP2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 OLFM3Q96PB7 478 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 TRIB3Q96RU7 358 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 TSSK6Q9BXA6 273 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 RHOFQ9HBH0 211 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 DIABLOQ9NR28 239 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 NXT1Q9UKK6 140 aaKnown RBP2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 TRIOBPQ9H2D6 2365 aa2.2□□□□□ -2.06
HMGCS1-207ENST00000514610 IGKV1D-37A0A075B6S9 117 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 TRAV8-3A0A0A6YYJ7 113 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 RAB19A4D1S5 217 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 BOLA2-SMG1P6H3BVE0 249 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 SYNGR2O43760 224 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 MLNP12872 115 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 CTLA4P16410 223 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 RBM45Q8IUH3 476 aaKnown RBP2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 CDRT4Q8N9R6 151 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 BPIFB6Q8NFQ5 453 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 OR4K17Q8NGC6 315 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 OR5P2Q8WZ92 322 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 OR5P3Q8WZ94 311 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 APOBEC3DQ96AK3 386 aaPredicted RBP2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 ZMYND19Q96E35 227 aaPredicted RBP2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 OR5V1Q9UGF6 321 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 NLRC5Q86WI3 1866 aa2.19□□□□□ -2.06
HMGCS1-207ENST00000514610 A0A1B0GU33 70 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 A0A1B0GW15 77 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 A0A1W2PNM2 257 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 A6NED7 52 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 PSMD11O00231 422 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 CDIPTO14735 213 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 PSIP1O75475 530 aaKnown RBP2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 CA2P00918 260 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 CCDC172P0C7W6 258 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 CCL2P13500 99 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 LCN1P31025 176 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 GZMMP51124 257 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 BAXQ07812 192 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 CASP8Q14790 479 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 NXNL2Q5VZ03 156 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 ELP2Q6IA86 826 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 LAIR2Q6ISS4 152 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 PDCL2Q8N4E4 241 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 ZIC4Q8N9L1 334 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 LRRC20Q8TCA0 184 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 PYURFQ96I23 114 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 SUCNR1Q9BXA5 334 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 OR2D2Q9H210 308 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 MFSD1Q9H3U5 465 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 TMBIM4Q9HC24 238 aa2.18□□□□□ -2.06
HMGCS1-207ENST00000514610 SPOPO43791 374 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 PDCD6O75340 191 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 ELK4P28324 431 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 S100A2P29034 98 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 TSPOP30536 169 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 TRAM1Q15629 374 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 BCL2A1Q16548 175 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 CEACAM21Q3KPI0 293 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 HBMQ6B0K9 141 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 ST13P4Q8IZP2 240 aaPredicted RBP2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 GATD1Q8NB37 220 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 SIKE1Q9BRV8 207 aa2.17□□□□□ -2.06
HMGCS1-207ENST00000514610 FADS3Q9Y5Q0 445 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms