RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 SWI5Q1ZZU3 235 aa13.49□□□□□ -0.25
NUP54-214ENST00000514307 MST1LQ2TV78 715 aa13.49□□□□□ -0.25
NUP54-214ENST00000514307 OR51S1Q8NGJ8 323 aa13.49□□□□□ -0.25
NUP54-214ENST00000514307 LILRB1Q8NHL6 650 aaPredicted RBP13.49□□□□□ -0.25
NUP54-214ENST00000514307 RDH5Q92781 318 aa13.49□□□□□ -0.25
NUP54-214ENST00000514307 NEUROG1Q92886 237 aa13.49□□□□□ -0.25
NUP54-214ENST00000514307 OR14J1Q9UGF5 321 aa13.49□□□□□ -0.25
NUP54-214ENST00000514307 ANXA10Q9UJ72 324 aa13.49□□□□□ -0.25
NUP54-214ENST00000514307 KLF2Q9Y5W3 355 aaPredicted RBP13.49□□□□□ -0.25
NUP54-214ENST00000514307 TRBV6-6A0A0A6YYG2 114 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 KIR2DS1A0A191URI9 304 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 FUOMA2VDF0 154 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 M0QYG6 137 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 SSX4O60224 188 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 PRAF2O60831 178 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 FCGR3AP08637 254 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 LOXP28300 417 aaPredicted RBP13.48□□□□□ -0.25
NUP54-214ENST00000514307 HRH1P35367 487 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 KIR2DS4P43632 304 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 CCL8P80075 99 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 KIR2DS1Q14954 304 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 CDK10Q15131 360 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 MICBQ29980 383 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 OR52W1Q6IF63 320 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 Q6ZS49 121 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 BOLLQ8N9W6 283 aaKnown RBP13.48□□□□□ -0.25
NUP54-214ENST00000514307 OR6F1Q8NGZ6 308 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 TERB2Q8NHR7 220 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 TINAGL1Q9GZM7 467 aaPredicted RBP13.48□□□□□ -0.25
NUP54-214ENST00000514307 RAB1BQ9H0U4 201 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 PPA2Q9H2U2 334 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 SAP30LQ9HAJ7 183 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 NECAP2Q9NVZ3 263 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 SLC2A8Q9NY64 477 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 IL36RNQ9UBH0 155 aa13.48□□□□□ -0.25
NUP54-214ENST00000514307 ZNF230Q9UIE0 474 aaPredicted RBP13.48□□□□□ -0.25
NUP54-214ENST00000514307 RFPL4AA6NLU0 287 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 OR2AT4A6NND4 320 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 RFPL4AL1F8VTS6 287 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 SIRPB1O00241 398 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 SLC33A1O00400 549 aaPredicted RBP13.47□□□□□ -0.25
NUP54-214ENST00000514307 WNT9BO14905 357 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 SIAH2O43255 324 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 MUC1P15941 1255 aaPredicted RBP13.47□□□□□ -0.25
NUP54-214ENST00000514307 IDO2Q6ZQW0 420 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 GCSAMQ8N6F7 178 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 OR5D13Q8NGL4 314 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 SNAPC3Q92966 411 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 MED30Q96HR3 178 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 SLC6A7Q99884 636 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 GINS4Q9BRT9 223 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 WDR13Q9H1Z4 485 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 CBLN4Q9NTU7 201 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 NUDT15Q9NV35 164 aa13.47□□□□□ -0.25
NUP54-214ENST00000514307 GCN1Q92616 2671 aaKnown RBP13.47□□□□□ -0.25
NUP54-214ENST00000514307 ESPL1Q14674 2120 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 TRAV6A0A075B6T7 132 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 TRDCB7Z8K6 153 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 NAPSAO96009 420 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 ZNF735P0CB33 412 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 ECI1P42126 302 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 PPOXP50336 477 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 SCGB2B2Q4G0G5 96 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 SLC35E4Q6ICL7 350 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 MEX3BQ6ZN04 569 aaKnown RBP13.46□□□□□ -0.25
NUP54-214ENST00000514307 MOB1BQ7L9L4 216 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 OVCH2Q7RTZ1 564 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 RTN4RL2Q86UN3 420 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 OR4D10Q8NGI6 311 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 CCDC107Q8WV48 283 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 SPOCK3Q9BQ16 436 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 HDHD3Q9BSH5 251 aaPredicted RBP13.46□□□□□ -0.25
NUP54-214ENST00000514307 ALX4Q9H161 411 aaPredicted RBP13.46□□□□□ -0.25
NUP54-214ENST00000514307 TMEM165Q9HC07 324 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 GPN1Q9HCN4 374 aaPredicted RBP13.46□□□□□ -0.25
NUP54-214ENST00000514307 Q9N2K0 584 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 ZNF581Q9P0T4 197 aa13.46□□□□□ -0.25
NUP54-214ENST00000514307 SPENQ96T58 3664 aaKnown RBP13.45□□□□□ -0.26
NUP54-214ENST00000514307 HEATR1Q9H583 2144 aaKnown RBP13.45□□□□□ -0.26
NUP54-214ENST00000514307 TRAV38-1A0A0B4J264 116 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 PEX14O75381 377 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 CSN2P05814 226 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 PSG2P11465 335 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 IGFBP2P18065 325 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 GABRA2P47869 451 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 KCNJ8Q15842 424 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 FAAP20Q6NZ36 180 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 DHRS11Q6UWP2 260 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 ZNF497Q6ZNH5 498 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 PPP1R14BQ96C90 147 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 SNX22Q96L94 193 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 VRK1Q99986 396 aaPredicted RBP13.45□□□□□ -0.26
NUP54-214ENST00000514307 C20orf85Q9H1P6 137 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 EHFQ9NZC4 300 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 KCNIP1Q9NZI2 227 aa13.45□□□□□ -0.26
NUP54-214ENST00000514307 TMEM30CPA0ZSE6 113 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 FAM221AA4D161 298 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 HSPB6O14558 160 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 RLN1P04808 185 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms