RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 GPER1Q99527 375 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 URM1Q9BTM9 101 aaKnown RBP3.8□□□□□ -1.8
CLDND1-228ENST00000513873 HES7Q9BYE0 225 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 BARHL1Q9BZE3 327 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 ACTR6Q9GZN1 396 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 CST11Q9H112 138 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 ABCG5Q9H222 651 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 MMP28Q9H239 520 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 RNF167Q9H6Y7 350 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 FAM206AQ9NX38 181 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 COPZ2Q9P299 210 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 EXTL2Q9UBQ6 330 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 RAB22AQ9UL26 194 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 KLHDC2Q9Y2U9 406 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 AK6Q9Y3D8 172 aaKnown RBP3.8□□□□□ -1.8
CLDND1-228ENST00000513873 N6AMT1Q9Y5N5 214 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 POLEQ07864 2286 aa3.8□□□□□ -1.8
CLDND1-228ENST00000513873 NUP214P35658 2090 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ZNF469Q96JG9 3925 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 IGKV1D-43A0A0B4J1Z2 117 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 A0A1W2PPK0 400 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 J3QRK9 145 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 SULT1C2O00338 296 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 P2RY10O00398 339 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 MAGEB4O15481 346 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 SYNGR3O43761 229 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 RAMP1O60894 148 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 SRSF10O75494 262 aaKnown RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 RBBP9O75884 186 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 MAS1P04201 325 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 HCKP08631 526 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ACSM4P0C7M7 580 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 B4GALT1P15291 398 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ZNF32P17041 273 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ANXA7P20073 488 aaKnown RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 AGTR1P30556 359 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 RCVRNP35243 200 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 OPRM1P35372 400 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 TIMP3P35625 211 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ZNF93P35789 620 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 TGFBR1P36897 503 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 RPS27P42677 84 aaKnown RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 KIR3DL2P43630 455 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 CAMPP49913 170 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 MMP15P51511 669 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ACTBP60709 375 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ACTG1P63261 375 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ENDOGQ14249 297 aaKnown RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 GSG1Q2KHT4 349 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ODF4Q2M2E3 257 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 PCGF3Q3KNV8 242 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 GLYATL3Q5SZD4 288 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 TSPO2Q5TGU0 170 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ZNF57Q68EA5 555 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 TMEM211Q6ICI0 200 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 PLET1Q6UQ28 207 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 C3P1Q6ZMU1 363 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 Q6ZT83 130 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 UTS2BQ765I0 119 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 MRPL21Q7Z2W9 205 aaKnown RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 OR2W3Q7Z3T1 314 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 NFE4Q86UQ8 179 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 LAX1Q8IWV1 398 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 TOMM5Q8N4H5 51 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 CNEP1R1Q8N9A8 125 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 STEAP2Q8NFT2 490 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 OR1M1Q8NGA1 313 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 OR8B12Q8NGG6 310 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 OR52I2Q8NH67 350 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 KCNG3Q8TAE7 436 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 OR51E1Q8TCB6 317 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 HSD17B8Q92506 261 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 NABP1Q96AH0 204 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 APOBEC3DQ96AK3 386 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 MUCL1Q96DR8 90 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 FAM71F1Q96KD3 344 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 GPR137Q96N19 417 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ALKBH3Q96Q83 286 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 NUDT16L1Q9BRJ7 211 aaKnown RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 SFXN3Q9BWM7 321 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 OR2H1Q9GZK4 316 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 METTL17Q9H7H0 456 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 GPR84Q9NQS5 396 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ZNF71Q9NQZ8 489 aaPredicted RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 SLC7A10Q9NS82 523 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 NKIRAS2Q9NYR9 191 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 SPRR3Q9UBC9 169 aa3.79□□□□□ -1.8
CLDND1-228ENST00000513873 MRPS7Q9Y2R9 242 aaKnown RBP3.79□□□□□ -1.8
CLDND1-228ENST00000513873 ZNF816-ZNF321PA0A0X1KG74 233 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 A0A1B0GTH9 108 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 FAM240BA0A1B0GVZ2 78 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 GGT3PA6NGU5 568 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 ANKRD30BLA7E2S9 258 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 GABARAPH6UMI1 98 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 PIN1P1O15428 100 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 XRCC3O43542 346 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 GSTZ1O43708 216 aaPredicted RBP3.78□□□□□ -1.8
CLDND1-228ENST00000513873 ORC5O43913 435 aa3.78□□□□□ -1.8
CLDND1-228ENST00000513873 SNRNP200O75643 2136 aaKnown RBP3.78□□□□□ -1.8
CLDND1-228ENST00000513873 DHFRP00374 187 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms