RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ZNF596Q8TC21 504 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 MRAPQ8TCY5 172 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 CREB3L1Q96BA8 519 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 OR5M11Q96RB7 305 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 TBX5Q99593 518 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 CITED2Q99967 270 aaPredicted RBP5.77□□□□□ -1.49
USP46-208ENST00000512656 CLEC7AQ9BXN2 247 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 MMP28Q9H239 520 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 TMEM133Q9H2Q1 129 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 NEK6Q9HC98 313 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 UBE2J1Q9Y385 318 aaPredicted RBP5.77□□□□□ -1.49
USP46-208ENST00000512656 HILPDAQ9Y5L2 63 aa5.77□□□□□ -1.49
USP46-208ENST00000512656 TRGV10A0A0A0MS01 117 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 TRBV2A0A0J9YWF9 115 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 LOC107986453A0A1B0GWG9 222 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 A0A1W2PQL4 384 aaPredicted RBP5.76□□□□□ -1.49
USP46-208ENST00000512656 MEX3AA1L020 520 aaKnown RBP5.76□□□□□ -1.49
USP46-208ENST00000512656 FAM90A22PA8MWA6 464 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 F8VVB4 439 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 F8VWA3 439 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 M0R129 80 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 SH2D1BO14796 132 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 MITFO75030 526 aaPredicted RBP5.76□□□□□ -1.49
USP46-208ENST00000512656 INMTO95050 263 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 OCM2P0CE71 109 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 OCMP0CE72 109 aaPredicted RBP5.76□□□□□ -1.49
USP46-208ENST00000512656 PF4V1P10720 104 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 EPHA2P29317 976 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 ERP29P30040 261 aaKnown RBP5.76□□□□□ -1.49
USP46-208ENST00000512656 CEACAM3P40198 252 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 RASSF2P50749 326 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 MTCP1P56278 107 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 P2RX3P56373 397 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 ZNF91Q05481 1191 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 ZNF146Q15072 292 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 SPIN3Q5JUX0 258 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 TMEM244Q5VVB8 128 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 KDM4DQ6B0I6 523 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 LHFPL2Q6ZUX7 228 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 UTS2BQ765I0 119 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 KCTD20Q7Z5Y7 419 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 CENPVQ7Z7K6 275 aaPredicted RBP5.76□□□□□ -1.49
USP46-208ENST00000512656 RTN4RL2Q86UN3 420 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 OR10H4Q8NGA5 316 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 OR5AU1Q8NGC0 362 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 OR8J1Q8NGP2 316 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 WIPF2Q8TF74 440 aaPredicted RBP5.76□□□□□ -1.49
USP46-208ENST00000512656 STMN2Q93045 179 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 MYCBPQ99417 103 aaPredicted RBP5.76□□□□□ -1.49
USP46-208ENST00000512656 GABARAPL1Q9H0R8 117 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 GAL3ST2Q9H3Q3 398 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 RHOFQ9HBH0 211 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 DPM3Q9P2X0 92 aa5.76□□□□□ -1.49
USP46-208ENST00000512656 IGKV1-27A0A075B6S5 117 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 TCRBV4S1A1TA0A5B7 111 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 LEUTXA8MZ59 168 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 H3BSH0 61 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 M0QZK8 103 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 TOR1AO14656 332 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 CLIC3O95833 236 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 PRB2P02812 416 aaPredicted RBP5.75□□□□□ -1.49
USP46-208ENST00000512656 RPSAP08865 295 aaKnown RBP5.75□□□□□ -1.49
USP46-208ENST00000512656 PRKACAP17612 351 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 POU3F4P49335 361 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 PRRX1P54821 245 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 BLCAPP62952 87 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 CD83Q01151 205 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 BDH1Q02338 343 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 KPNB1Q14974 876 aaKnown RBP5.75□□□□□ -1.49
USP46-208ENST00000512656 HIST2H2BDQ6DRA6 164 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 CCDC144NLQ6NUI1 221 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 HEPN1Q6WQI6 88 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 SSX6Q7RTT6 188 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 TCF23Q7RTU1 214 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 ABHD12Q8N2K0 398 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 WFDC9Q8NEX5 89 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 PHF21AQ96BD5 680 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 SPSB1Q96BD6 273 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 SLC7A6OSQ96CW6 309 aaPredicted RBP5.75□□□□□ -1.49
USP46-208ENST00000512656 MRPL48Q96GC5 212 aaKnown RBP5.75□□□□□ -1.49
USP46-208ENST00000512656 CIB1Q99828 191 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 OSBPL10Q9BXB5 764 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 GPR61Q9BZJ8 451 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 CHST6Q9GZX3 395 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 HMG20AQ9NP66 347 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 EXOSC4Q9NPD3 245 aaKnown RBP5.75□□□□□ -1.49
USP46-208ENST00000512656 RBFOX1Q9NWB1 397 aaKnown RBP5.75□□□□□ -1.49
USP46-208ENST00000512656 IMPAD1Q9NX62 359 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 TAS2R3Q9NYW6 316 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 GNG8Q9UK08 70 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 AP4S1Q9Y587 144 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 TSSC4Q9Y5U2 329 aaPredicted RBP5.75□□□□□ -1.49
USP46-208ENST00000512656 COL7A1Q02388 2944 aa5.75□□□□□ -1.49
USP46-208ENST00000512656 A0A1W2PRX2 142 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 SNTNA6NMZ2 147 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 OOSP1A8MZH6 123 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 SIRPB1O00241 398 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 ENTPD6O75354 484 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 OR2F2O95006 317 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms