RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 LAPTM4AQ15012 233 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 PARP15Q460N3 678 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 SYCE2Q6PIF2 218 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 TFAP2EQ6VUC0 442 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 NAA40Q86UY6 237 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 SPNS2Q8IVW8 549 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR4K17Q8NGC6 315 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR4K15Q8NH41 348 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR4S2Q8NH73 311 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 PIK3IP1Q96FE7 263 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 FCRL1Q96LA6 429 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 EFCAB11Q9BUY7 163 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 PRORYQ9H606 182 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 RIMS3Q9UJD0 308 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 F5H5K5 113 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 SOX15O60248 233 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR7C1O76099 320 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR5AL1P0C617 328 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 BCL3P20749 454 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 TSFMP43897 325 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 POU3F1Q03052 451 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 CLINT1Q14677 625 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 NSUN5P1Q3KNT7 163 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 PLET1Q6UQ28 207 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 TRUB1Q8WWH5 349 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 IP6K3Q96PC2 410 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 HMG20AQ9NP66 347 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 DOK5Q9P104 306 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 ASF1AQ9Y294 204 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 YLPM1P49750 1951 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 FAM25AB3EWG3 89 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 FAM25CB3EWG5 89 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 FAM25GB3EWG6 89 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 ORC5O43913 435 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 HLA-DOBP13765 273 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 C4BPBP20851 252 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 CTRLP40313 264 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 RORCP51449 518 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 TCTAP57738 103 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 SNRPD1P62314 119 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 HOXA4Q00056 320 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 RPL18AQ02543 176 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 FASTKQ14296 549 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 NSDHLQ15738 373 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 ACOT6Q3I5F7 207 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 OTPQ5XKR4 325 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 STRADAQ7RTN6 431 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 VRK3Q8IV63 474 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 TSTD1Q8NFU3 115 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 GALMQ96C23 342 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 PLA2G2EQ9NZK7 142 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 MSRB1Q9NZV6 116 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 GNG8Q9UK08 70 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 VDAC3Q9Y277 283 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 L3MBTL1Q9Y468 752 aa5.13□□□□□ -1.59
TRAPPC11-209ENST00000512476 MCM3APO60318 1980 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 C2orf16Q68DN1 1984 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 MEIKINA0A087WXM9 373 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 LYRM9A8MSI8 78 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 SLC22A1O15245 554 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 GALR3O60755 368 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 STK16O75716 305 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 GYPCP04921 128 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 IFNA4P05014 189 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 S100A8P05109 93 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 FGF2P09038 288 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 APLNRP35414 380 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 SOX3P41225 446 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 RUNX3Q13761 415 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 CEACAM16Q2WEN9 425 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNF684Q5T5D7 378 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNF343Q6P1L6 599 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 GFRALQ6UXV0 394 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 TCF24Q7RTU0 167 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 C4orf33Q8N1A6 199 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNRF1Q8ND25 227 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNF740Q8NDX6 193 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR52L1Q8NGH7 329 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR1S1Q8NH92 325 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 PYURFQ96I23 114 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 LSM5Q9Y4Y9 91 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 MYH11P35749 1972 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 RBMY1BA6NDE4 496 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 RBMY1EA6NEQ0 496 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNF814B7Z6K7 855 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 MPPED1O15442 326 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 MGRN1O60291 552 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 RBMY1DP0C7P1 496 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 RBMY1A1P0DJD3 496 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 PRSS3P35030 304 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 RPA3P35244 121 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR12D2P58182 307 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 CRHR2Q13324 411 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 CCSMST1Q4G0I0 132 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 FAM106AQ4KMX7 169 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 ATP6AP1LQ52LC2 224 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 RNASE10Q5GAN6 216 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 REP15Q6BDI9 236 aa5.12□□□□□ -1.59
TRAPPC11-209ENST00000512476 TMEM150AQ86TG1 271 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms