RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 C4orf3Q8WVX3 66 aa14.8□□□□□ -0.04
HMGCS1-206ENST00000511774 PPIL3Q9H2H8 161 aaKnown RBP14.8□□□□□ -0.04
HMGCS1-206ENST00000511774 ZMAT4Q9H898 229 aa14.8□□□□□ -0.04
HMGCS1-206ENST00000511774 REEP1Q9H902 201 aa14.8□□□□□ -0.04
HMGCS1-206ENST00000511774 MRM2Q9UI43 246 aaKnown RBP14.8□□□□□ -0.04
HMGCS1-206ENST00000511774 AP4M1O00189 453 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 E2F6O75461 281 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 SPNP16150 400 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 TNCP24821 2201 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 PRDX6P30041 224 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 FUT6P51993 359 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 PGAM4Q8N0Y7 254 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 OR4D6Q8NGJ1 314 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 ASB17Q8WXJ9 295 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 MOB1AQ9H8S9 216 aa14.79□□□□□ -0.04
HMGCS1-206ENST00000511774 IGKV1-12A0A0C4DH73 117 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 J3QR06 171 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 IGKV1D-12P01611 117 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 ELANEP08246 267 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 POU3F4P49335 361 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 CXCR4P61073 352 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 KIAA0141Q14154 515 aaPredicted RBP14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 ZNF322Q6U7Q0 402 aaPredicted RBP14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 HDXQ7Z353 690 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 Q8N6K4 173 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 Q8N9W7 124 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 GIPC3Q8TF64 312 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 RNFT2Q96EX2 444 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 CHST5Q9GZS9 411 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 ABCG5Q9H222 651 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 CCDC134Q9H6E4 229 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 GNB4Q9HAV0 340 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 HMG20AQ9NP66 347 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 PCDHB16Q9NRJ7 776 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 PSG11Q9UQ72 335 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 GSTK1Q9Y2Q3 226 aa14.78□□□□□ -0.04
HMGCS1-206ENST00000511774 IGHV3-72A0A0B4J1Y9 119 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 IGKV1-9A0A0C4DH69 117 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 IGHG4P01861 327 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 HMGN1P05114 100 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 CDC42P60953 191 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 EBI3Q14213 229 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 SPIN3Q5JUX0 258 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 Q6P435 159 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 SSX6Q7RTT6 188 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 BCDIN3DQ7Z5W3 292 aaKnown RBP14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 Q8IYB0 196 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 MYOZ3Q8TDC0 251 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 ISOC1Q96CN7 298 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 BORCS8Q96FH0 119 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 EAF1Q96JC9 268 aaPredicted RBP14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 HSPB9Q9BQS6 159 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 EXOSC4Q9NPD3 245 aaKnown RBP14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 ISYNA1Q9NPH2 558 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 PLSCR3Q9NRY6 295 aa14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 SIRT4Q9Y6E7 314 aaPredicted RBP14.77□□□□□ -0.05
HMGCS1-206ENST00000511774 ZNF729A6NN14 1252 aaPredicted RBP14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 PSMB8P28062 276 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 INSL3P51460 131 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 GNB1P62873 340 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 ATXN7L3Q14CW9 347 aaPredicted RBP14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 KRBOX4Q5JUW0 171 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 TGIF2LXQ8IUE1 241 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 HS3ST5Q8IZT8 346 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 KLK15Q9H2R5 256 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 MAGIXQ9H6Y5 334 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 ACTR3BQ9P1U1 418 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 GLS2Q9UI32 602 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 SNX5Q9Y5X3 404 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 TMEM14AQ9Y6G1 99 aa14.76□□□□□ -0.05
HMGCS1-206ENST00000511774 PCLOQ9Y6V0 5065 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 KBTBD11-OT1A0A1B0GTJ5 212 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 A0A1W2PPE3 182 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 I3L521 148 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 RPP14O95059 124 aaKnown RBP14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 GP9P14770 177 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 VEGFCP49767 419 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 MADCAM1Q13477 382 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 FAM27D1Q5T7N8 215 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 OR8H3Q8N146 312 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 OR13A1Q8NGR1 328 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 DCUN1D4Q92564 292 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 RFT1Q96AA3 541 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 HRASLS5Q96KN8 279 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 COMMD4Q9H0A8 199 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 PLEKHA1Q9HB21 404 aa14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 LIN7CQ9NUP9 197 aaKnown RBP14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 AMMECR1Q9Y4X0 333 aaPredicted RBP14.75□□□□□ -0.05
HMGCS1-206ENST00000511774 NCBP2LA6PVI3 153 aaKnown RBP14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 M0R129 80 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 SLC33A1O00400 549 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 SH2D1BO14796 132 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 CSN2P05814 226 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 OSMP13725 252 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 REG1BP48304 166 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 GNG10P50151 68 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 RAB7AP51149 207 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 SCN1BQ07699 218 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 CATSPERDQ86XM0 798 aa14.74□□□□□ -0.05
HMGCS1-206ENST00000511774 SLC35F2Q8IXU6 374 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms