RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ZNF44P15621 663 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 BDKRB2P30411 391 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 PTGFRP43088 359 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 OR3A4PP47883 348 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 GLIPR1P48060 266 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 PPP3R1P63098 170 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 AESQ08117 197 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 LDLRAD2Q5SZI1 272 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 DDI2Q5TDH0 399 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 ZNF626Q68DY1 528 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 SHISA2Q6UWI4 295 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 GDPGP1Q6ZNW5 385 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 LHFPL4Q7Z7J7 247 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 OR11H6Q8NGC7 330 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 OR13D1Q8NGV5 346 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 OR10K1Q8NGX5 313 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 CORO2AQ92828 525 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 COQ2Q96H96 371 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 SSX3Q99909 188 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 UBE2J1Q9Y385 318 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 KIAA2026Q5HYC2 2103 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 TRAV8-7A0A075B6U6 113 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 PNMA8CA0A1B0GUJ8 204 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 CLPSL1A2RUU4 121 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 MAGEA13PA6NCF6 341 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 BTBD17A6NE02 478 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 H3BUX3 64 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 MYL12BO14950 172 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 MMP23AO75900 390 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 CDRT1O95170 752 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 CELP19835 753 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 FSTP19883 344 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 ZNF93P35789 620 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 RIPK1Q13546 671 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 IL13RA2Q14627 380 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 AANATQ16613 207 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 LRRC75BQ2VPJ9 315 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 DYNAPQ8N1N2 210 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 PIFOQ8TCI5 191 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 SGCDQ92629 289 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 OR14A2Q96R54 314 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 NR1H4Q96RI1 486 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 SLITRK2Q9H156 845 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 BEX1Q9HBH7 125 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 PAK1IP1Q9NWT1 392 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 IL36GQ9NZH8 169 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 ERGIC3Q9Y282 383 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 SESN1Q9Y6P5 492 aa9.42□□□□□ -0.9
SH3RF1-205ENST00000511421 TRAV24A0A0B4J272 114 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 A0A1W2PPK0 400 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 ODAMA1E959 279 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 FUOMA2VDF0 154 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 PTGES3LE9PB15 166 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 PIN1P1O15428 100 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 CLPXO76031 633 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 ARG1P05089 322 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 TGFBR2P37173 567 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 LGALS4P56470 323 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 BDH1Q02338 343 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 RSU1Q15404 277 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 PIGYQ3MUY2 71 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 OLFML2AQ68BL7 652 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 Q6ZSV7 163 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 LINC01006Q8NI28 216 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 ZNF184Q99676 751 aaPredicted RBP9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 CDCA4Q9BXL8 241 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 FAM192AQ9GZU8 254 aa9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 LSM2Q9Y333 95 aaKnown RBP9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 TBL2Q9Y4P3 447 aaKnown RBP9.41□□□□□ -0.9
SH3RF1-205ENST00000511421 TRGV10A0A0A0MS01 117 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 IGHV2-26A0A0B4J1V2 119 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 MEGF11A6BM72 1044 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 HTR3BO95264 441 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 MYF6P23409 242 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 SLC35A2P78381 396 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 IRF3Q14653 427 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 ATXN7L3Q14CW9 347 aaPredicted RBP9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 NHLRC3Q5JS37 347 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 KRBOX4Q5JUW0 171 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 DHRS7BQ6IAN0 325 aaPredicted RBP9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 BAIAP2L2Q6UXY1 529 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 TRAPPC6BQ86SZ2 158 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 WFDC12Q8WWY7 111 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 MALSU1Q96EH3 234 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 DERL3Q96Q80 235 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 OR5M11Q96RB7 305 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 ANKRD60Q9BZ19 345 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 METTL9Q9H1A3 318 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 PPIL3Q9H2H8 161 aaKnown RBP9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 TMEM133Q9H2Q1 129 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 C16orf95Q9H693 158 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 SCN3BQ9NY72 215 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 TAS2R3Q9NYW6 316 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 ZNF581Q9P0T4 197 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 CKLFQ9UBR5 152 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 ING4Q9UNL4 249 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 FOXJ3Q9UPW0 622 aa9.4□□□□□ -0.9
SH3RF1-205ENST00000511421 MGAM2Q2M2H8 2515 aa9.4□□□□□ -0.91
SH3RF1-205ENST00000511421 VGLL3A8MV65 326 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms