RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PLXNB3Q9ULL4 1909 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 TRAV8-3A0A0A6YYJ7 113 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 IGHV3-43A0A0B4J1X8 118 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 PGPA6NDG6 321 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 A6NED7 52 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 FFAR1O14842 300 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 CPSF4O95639 269 aaKnown RBP1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 IGHV3-53P01767 116 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 IGKV5-2P06315 115 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 LGALS7P47929 136 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 GCLMP48507 274 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 TTPAP49638 278 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 FOXA1P55317 472 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 TSPAN5P62079 268 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 TRAM1Q15629 374 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 KRTAP25-1Q3LHN0 102 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF470Q6ECI4 717 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 WDR59Q6PJI9 974 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 FAM19A1Q7Z5A9 133 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 BPIFB6Q8NFQ5 453 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 CASTOR1Q8WTX7 329 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 CATSPER2Q96P56 530 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 PITX2Q99697 317 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 AGPAT3Q9NRZ7 376 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 NAGKQ9UJ70 344 aa1.62□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZSWIM8A7E2V4 1837 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 LOC100506127A0A0U1RQW1 187 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 A0A1B0GXF2 115 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 GOLGA8IPA6NC78 632 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 A8MWP4 228 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 GGTLC3B5MD39 225 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 E7EQL1 145 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 UBDO15205 165 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 HLA-AP01891 365 aaKnown RBP1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 ELK4P28324 431 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 RPA3P35244 121 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 TGFBR2P37173 567 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 CBX5P45973 191 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 GOLGA7BQ2TAP0 167 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 C18orf21Q32NC0 220 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 Q3ZCU0 254 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 GLYATQ6IB77 296 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 HCP5Q6MZN7 132 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 Q6ZQT7 251 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 SPICQ8N5J4 248 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 LY6G5BQ8NDX9 201 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 OR2M3Q8NG83 312 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 OR2AE1Q8NHA4 323 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 MUC7Q8TAX7 377 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 SLC25A44Q96H78 314 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 BIRC8Q96P09 236 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 OLFM3Q96PB7 478 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 GOLPH3Q9H4A6 298 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 IFT46Q9NQC8 304 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 NXT1Q9UKK6 140 aaKnown RBP1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 BTRCQ9Y297 605 aa1.61□□□□□ -2.15
TRAPPC11-207ENST00000511409 NACADO15069 1562 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 NOS1P29475 1434 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 SPATA31E1Q6ZUB1 1445 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 LTBP4Q8N2S1 1624 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 MYBPHLA2RUH7 354 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 BOLA2-SMG1P6H3BVE0 249 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 I3L4J1 428 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 APOA1P02647 267 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 IVLP07476 585 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 SLC2A1P11166 492 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 CCL2P13500 99 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 LGALS3P17931 250 aaKnown RBP1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 PSMB9P28065 219 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 ETV1P50549 477 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 HBG1P69891 147 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 HBG2P69892 147 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 BCL2A1Q16548 175 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 AADACL4Q5VUY2 407 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 TMEM215Q68D42 235 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 AHSA2Q719I0 299 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 COMTD1Q86VU5 262 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 RPRMLQ8N4K4 120 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 C3orf22Q8N5N4 141 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF738Q8NE65 137 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 TRIB3Q96RU7 358 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 NUP205Q92621 2012 aa1.6□□□□□ -2.15
TRAPPC11-207ENST00000511409 COL5A1P20908 1838 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 A0A1W2PRG6 482 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 H3BMM0 161 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 SHOX2O60902 331 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 POP7O75817 140 aaKnown RBP1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 GABRA1P14867 456 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 SPNP16150 400 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 PYCR1P32322 319 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 MAGEA3P43357 314 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 GZMMP51124 257 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 PRDX1Q06830 199 aaKnown RBP1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 CEACAM21Q3KPI0 293 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 ELP2Q6IA86 826 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 LAIR2Q6ISS4 152 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 CYHR1Q6ZMK1 362 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 LYZL2Q7Z4W2 148 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 MARCH3Q86UD3 253 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 LRRC6Q86X45 466 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms