RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ENTHD1Q8IYW4 607 aa12.57□□□□□ -0.4
RAB40C-202ENST00000509637 KIRREL1Q96J84 757 aa12.57□□□□□ -0.4
RAB40C-202ENST00000509637 MBOAT4Q96T53 435 aa12.57□□□□□ -0.4
RAB40C-202ENST00000509637 P2RX4Q99571 388 aa12.57□□□□□ -0.4
RAB40C-202ENST00000509637 CIB1Q99828 191 aa12.57□□□□□ -0.4
RAB40C-202ENST00000509637 B9D2Q9BPU9 175 aa12.57□□□□□ -0.4
RAB40C-202ENST00000509637 A0A1W2PPI3 338 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 BRS3P32247 399 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 RPL23AP62750 156 aaKnown RBP12.56□□□□□ -0.4
RAB40C-202ENST00000509637 SCN1BQ07699 218 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 IL18R1Q13478 541 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 ATP6AP1Q15904 470 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 SPIN3Q5JUX0 258 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 NKAPLQ5M9Q1 402 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 ZBTB49Q6ZSB9 765 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 OR2W3Q7Z3T1 314 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 GID4Q8IVV7 300 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 Q8IYB0 196 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 OR4X2Q8NGF9 303 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 OR13A1Q8NGR1 328 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 ZNF596Q8TC21 504 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 CAPSLQ8WWF8 208 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 PP6455Q8WZ26 134 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 GABARAPL1Q9H0R8 117 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 EXOSC4Q9NPD3 245 aaKnown RBP12.56□□□□□ -0.4
RAB40C-202ENST00000509637 AASSQ9UDR5 926 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 GNG8Q9UK08 70 aa12.56□□□□□ -0.4
RAB40C-202ENST00000509637 TRGV10A0A0A0MS01 117 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 TRAV39A0A0B4J263 110 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 PSMB11A5LHX3 300 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 G3V2T6 193 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 SH2D1BO14796 132 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 ZP1P60852 638 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 CDC42P60953 191 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 ATXN7L3Q14CW9 347 aaPredicted RBP12.55□□□□□ -0.4
RAB40C-202ENST00000509637 OR52W1Q6IF63 320 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 LCNL1Q6ZST4 164 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 DRAM1Q8N682 238 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 OR56B4Q8NH76 319 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 WWC2-AS2Q96NR7 200 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 OPALINQ96PE5 141 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 ZNF649Q9BS31 505 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 ADI1Q9BV57 179 aa12.55□□□□□ -0.4
RAB40C-202ENST00000509637 OR4C45A6NMZ5 311 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 GYG2O15488 501 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 SERPINA3P01011 423 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 CSN2P05814 226 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 HOXB6P17509 224 aaKnown RBP12.54□□□□□ -0.4
RAB40C-202ENST00000509637 CD69Q07108 199 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 RBM39Q14498 530 aaKnown RBP12.54□□□□□ -0.4
RAB40C-202ENST00000509637 HNF4GQ14541 408 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 KRBOX4Q5JUW0 171 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 FDX2Q6P4F2 183 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 LHFPL2Q6ZUX7 228 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 THNSL2Q86YJ6 484 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 CCDC54Q8NEL0 328 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 OR13C9Q8NGT0 318 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 PLPPR1Q8TBJ4 325 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 GAL3ST2Q9H3Q3 398 aa12.54□□□□□ -0.4
RAB40C-202ENST00000509637 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAB40C-202ENST00000509637 TRAV24A0A0B4J272 114 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 KBTBD11-OT1A0A1B0GTJ5 212 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 A0A1W2PPE3 182 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 E9PQ18 207 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 J3QR06 171 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 DUS4LO95620 317 aaKnown RBP12.53□□□□□ -0.4
RAB40C-202ENST00000509637 ISG15P05161 165 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 UBCP0CG48 685 aaKnown RBP12.53□□□□□ -0.4
RAB40C-202ENST00000509637 ZNF44P15621 663 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 PRKACBP22694 351 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 NFYBP25208 207 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 KPNB1Q14974 876 aaKnown RBP12.53□□□□□ -0.4
RAB40C-202ENST00000509637 TMEM244Q5VVB8 128 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 RFESDQ8TAC1 157 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 AKR1E2Q96JD6 320 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 KIF25Q9UIL4 384 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 PSG11Q9UQ72 335 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 MOB4Q9Y3A3 225 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 LSM4Q9Y4Z0 139 aaKnown RBP12.53□□□□□ -0.4
RAB40C-202ENST00000509637 HSPE1-MOB4S4R3N1 261 aa12.53□□□□□ -0.4
RAB40C-202ENST00000509637 HUWE1Q7Z6Z7 4374 aaKnown RBP12.53□□□□□ -0.4
RAB40C-202ENST00000509637 ZNF729A6NN14 1252 aaPredicted RBP12.52□□□□□ -0.41
RAB40C-202ENST00000509637 H0YHG0 523 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 HSPB6O14558 160 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 TOR1AO14656 332 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 MT-ND2P03891 347 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 PTGFRP43088 359 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 OR9G1Q8NH87 305 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 TFAP2CQ92754 450 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 PELI1Q96FA3 418 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 CYYR1Q96J86 154 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 GABARAPL3Q9BY60 117 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 PRRG3Q9BZD7 231 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 LINC00574Q9H8X3 128 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 MYRFQ9Y2G1 1151 aa12.52□□□□□ -0.41
RAB40C-202ENST00000509637 OOSP1A8MZH6 123 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms