RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 GP2P55259 537 aaKnown RBP12.6□□□□□ -0.39
CXCL1-202ENST00000509101 CDC42P60953 191 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 SLC35B1P78383 322 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 C9orf66Q5T8R8 295 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 MEPCEQ7L2J0 689 aaKnown RBP12.6□□□□□ -0.39
CXCL1-202ENST00000509101 SSX6Q7RTT6 188 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 SLC35E3Q7Z769 313 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 SPATA24Q86W54 205 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 CATSPERDQ86XM0 798 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 YIPF7Q8N8F6 280 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 MNTQ99583 582 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 TBX5Q99593 518 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 GSTK1Q9Y2Q3 226 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 TCRBV3S1A0A5B6 114 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 ODAMA1E959 279 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FUOMA2VDF0 154 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A18PA6NE21 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A16PA6NEW6 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A20PA6NIJ5 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A12PA8MX19 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A5PA8MXJ8 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 SERPINA3P01011 423 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A15PP0C7V4 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A13PP0C7W8 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A14PP0C7W9 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 FAM90A24PP0C7X0 464 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 ANXA8P13928 327 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 RBP2P50120 134 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 ATP1B3P54709 279 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 STPG2Q8N412 459 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 COMMD1Q8N668 190 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 DRAM1Q8N682 238 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 OR5M8Q8NGP6 311 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 RFT1Q96AA3 541 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 COQ2Q96H96 371 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 PCDHB16Q9NRJ7 776 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 CLN6Q9NWW5 311 aa12.59□□□□□ -0.39
CXCL1-202ENST00000509101 GAR1Q9NY12 217 aaKnown RBP12.59□□□□□ -0.39
CXCL1-202ENST00000509101 DNAH1Q9P2D7 4330 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 A0A087X0M5 115 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 LOC107986453A0A1B0GWG9 222 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 A0A1B0GX30 115 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 A0A1W2PPI3 338 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 SH2D1BO14796 132 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 FGF16O43320 207 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 IGHV3-7P01780 117 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 RPLP1P05386 114 aaKnown RBP12.58□□□□□ -0.4
CXCL1-202ENST00000509101 KRT8P05787 483 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 ZNF44P15621 663 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 CRISP1P54107 249 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 HNF4GQ14541 408 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 ATXN7L3Q14CW9 347 aaPredicted RBP12.58□□□□□ -0.4
CXCL1-202ENST00000509101 C17orf58Q2M2W7 97 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 KRBOX4Q5JUW0 171 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 LCNL1Q6ZST4 164 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 THNSL2Q86YJ6 484 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 FOXRED2Q8IWF2 684 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 DNAAF1Q8NEP3 725 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 Q8NFD4 153 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 OR9G1Q8NH87 305 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 ADI1Q9BV57 179 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 HMG20AQ9NP66 347 aa12.58□□□□□ -0.4
CXCL1-202ENST00000509101 AMMECR1Q9Y4X0 333 aaPredicted RBP12.58□□□□□ -0.4
CXCL1-202ENST00000509101 IGKV1-9A0A0C4DH69 117 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 ZNF729A6NN14 1252 aaPredicted RBP12.57□□□□□ -0.4
CXCL1-202ENST00000509101 SEC14L6B5MCN3 397 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 FKBP6O75344 327 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 ATP5HO75947 161 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 IGKV1D-33P01593 117 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 IGKV1-33P01594 117 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 IGHG2P01859 326 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 MTCP1P56278 107 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 SCN1BQ07699 218 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 DIAPH2-AS1Q14236 149 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 OR8U1Q8NH10 309 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 PP6455Q8WZ26 134 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 KIRREL1Q96J84 757 aa12.57□□□□□ -0.4
CXCL1-202ENST00000509101 PPIL3Q9H2H8 161 aaKnown RBP12.57□□□□□ -0.4
CXCL1-202ENST00000509101 H2AFY2Q9P0M6 372 aaPredicted RBP12.57□□□□□ -0.4
CXCL1-202ENST00000509101 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 IGKV1-12A0A0C4DH73 117 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 LINC01548A6NM66 108 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 IGKV1D-12P01611 117 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 CHATP28329 748 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 GLP1RP43220 463 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 PTGES3Q15185 160 aaKnown RBP12.56□□□□□ -0.4
CXCL1-202ENST00000509101 AADACL4Q5VUY2 407 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 NXNL2Q5VZ03 156 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 TEX38Q6PEX7 206 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 LHFPL2Q6ZUX7 228 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 PRSS35Q8N3Z0 413 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 TCEANCQ8N8B7 351 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 CCDC54Q8NEL0 328 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 ADAT3Q96EY9 351 aaPredicted RBP12.56□□□□□ -0.4
CXCL1-202ENST00000509101 PRRG3Q9BZD7 231 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 COMMD4Q9H0A8 199 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 DCLRE1BQ9H816 532 aa12.56□□□□□ -0.4
CXCL1-202ENST00000509101 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms