RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 IL36GQ9NZH8 169 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 ABCA1O95477 2261 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 MALRD1Q5VYJ5 2156 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 CSMD2Q7Z408 3487 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 FLNAP21333 2647 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PPIAL4EA0A075B759 164 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 hCG_1807616A0A1W2PRN6 198 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 OOEPA6NGQ2 149 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 A6NIN4 97 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PPIAL4DF5H284 164 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 TRAPPC2LH3BP13 241 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 H3BSH0 61 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 LGALS8O00214 317 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 CDIPTO14735 213 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PPIHO43447 177 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 AIREO43918 545 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 LMX1BO60663 402 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 NDUFS7O75251 213 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PGA5P0DJD9 388 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PPIAL4FP0DN26 164 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 RAB3BP20337 219 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 GLRA1P23415 457 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 CALRP27797 417 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 MDH2P40926 338 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PMELP40967 661 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PTGFRP43088 359 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 NR4A2P43354 598 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 ART1P52961 327 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 BTG1P62324 171 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 MPPED2Q15777 294 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 MICBQ29980 383 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 SMIM21Q3B7S5 101 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 C1orf100Q5SVJ3 147 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 DDI2Q5TDH0 399 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PRAMEF6Q5VXH4 476 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 TEX36Q5VZQ5 186 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 ELP2Q6IA86 826 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 ASPHD2Q6ICH7 369 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 HAGHLQ6PII5 290 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 WDR82Q6UXN9 313 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 ASCL4Q6XD76 172 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 SPNS3Q6ZMD2 512 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 WDR86Q86TI4 376 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 LRRTM1Q86UE6 522 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 LRRC28Q86X40 367 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 GCSAMQ8N6F7 178 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 ZNF525Q8N782 197 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 POC1AQ8NBT0 407 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 Q8NFD4 153 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR13C5Q8NGS8 318 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR51F2Q8NH61 342 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 TRMT10AQ8TBZ6 339 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 C10orf105Q8TEF2 133 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 LRRC29Q8WV35 223 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 DPF1Q92782 380 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 RPL3LQ92901 407 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 YIPF5Q969M3 257 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 TMIGD2Q96BF3 282 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 MRPS24Q96EL2 167 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 FGF23Q9GZV9 251 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 METTL9Q9H1A3 318 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 HES4Q9HCC6 221 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 EXOSC4Q9NPD3 245 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 UFSP2Q9NUQ7 469 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 TXNL4BQ9NX01 149 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 NDUFA13Q9P0J0 144 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 KAAG1Q9UBP8 84 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 MIOXQ9UGB7 285 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 GLS2Q9UI32 602 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 PPIAL4AQ9Y536 164 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 V9GY05 133 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 CSPG4Q6UVK1 2322 aa4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 YLPM1P49750 1951 aaKnown RBP4.58□□□□□ -1.68
HMGB1P44-201ENST00000508597 IGKV1-27A0A075B6S5 117 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 TRAV8-7A0A075B6U6 113 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 A0A1W2PPK0 400 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM90A10PA6NDY2 464 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM90A8PA6NJQ4 464 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM90A7PA6NKC0 464 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM90A22PA8MWA6 464 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM90A12PA8MX19 464 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM90A23PA8MXZ1 464 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 ZNF701M0R085 212 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 SLC17A2O00624 439 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 AKR7A2O43488 359 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 NOL3O60936 208 aaKnown RBP4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 RBMXL2O75526 392 aaKnown RBP4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 KDM4BO94953 1096 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 NXPH2O95156 264 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 GABARAPO95166 117 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 IL1AP01583 271 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 IGHV2-70P01814 119 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 MAS1P04201 325 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 HNRNPCP07910 306 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM90A13PP0C7W8 464 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 FAM90A24PP0C7X0 464 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 USF1P22415 310 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 GADD45AP24522 165 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 HTR2CP28335 458 aa4.57□□□□□ -1.68
HMGB1P44-201ENST00000508597 POU3F4P49335 361 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms