RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 INSL4Q14641 139 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 RAB11BQ15907 218 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 PAN3Q58A45 887 aaKnown RBP7.55□□□□□ -1.2
NUP54-207ENST00000508583 C1orf100Q5SVJ3 147 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 CRIP3Q6Q6R5 217 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 DUX4L9Q6RFH8 374 aaPredicted RBP7.55□□□□□ -1.2
NUP54-207ENST00000508583 GDPGP1Q6ZNW5 385 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 TPRA1Q86W33 373 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 FAM185AQ8N0U4 392 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 BPIFB2Q8N4F0 458 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 KCTD7Q96MP8 289 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 JMJD8Q96S16 334 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 PCGF1Q9BSM1 259 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 BARHL1Q9BZE3 327 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 OR6C3Q9NZP0 311 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 DUX4Q9UBX2 424 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 OPN4Q9UHM6 478 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 NUP50Q9UKX7 468 aa7.55□□□□□ -1.2
NUP54-207ENST00000508583 TRGV10A0A0A0MS01 117 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 A0A0A6YYJ9 748 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 A0A0G2JK05 382 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 SLC33A1O00400 549 aaPredicted RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 SLC22A1O15245 554 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 TMEM127O75204 238 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 GLAP06280 429 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 CALCBP10092 127 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 ARSBP15848 533 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 MGMTP16455 207 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 JUNBP17275 347 aaPredicted RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 RAB3BP20337 219 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 EPHA1P21709 976 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 DUSP1P28562 367 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 P2RX3P56373 397 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 ERVFRD-1P60508 538 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 ARF6P62330 175 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 PAX5Q02548 391 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 EDDM3AQ14507 147 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 PIGYQ3MUY2 71 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 KRBOX4Q5JUW0 171 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 C22orf42Q6IC83 251 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 METAP1DQ6UB28 335 aaPredicted RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 RBMS3Q6XE24 437 aaKnown RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 C17orf107Q6ZR85 190 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 OR2W3Q7Z3T1 314 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 RNF144BQ7Z419 303 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 TRAPPC6BQ86SZ2 158 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 LYPD6Q86Y78 171 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 OR4D6Q8NGJ1 314 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 OR10K1Q8NGX5 313 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 NEK7Q8TDX7 302 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 ZNF418Q8TF45 676 aaPredicted RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 ZNF714Q96N38 554 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 URM1Q9BTM9 101 aaKnown RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 SUCNR1Q9BXA5 334 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 TMEM59Q9BXS4 323 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 MRPS26Q9BYN8 205 aaKnown RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 SELENOIQ9C0D9 397 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 MS4A7Q9GZW8 240 aaPredicted RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 GAL3ST2Q9H3Q3 398 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 NCOR1P1Q9H4R4 102 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 RAB9BQ9NP90 201 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 IL36RNQ9UBH0 155 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 STEAP1Q9UHE8 339 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 UBE2J1Q9Y385 318 aaPredicted RBP7.54□□□□□ -1.2
NUP54-207ENST00000508583 LINC00312Q9Y6C7 94 aa7.54□□□□□ -1.2
NUP54-207ENST00000508583 TRAV40A0A0B4J280 105 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 LOC100506127A0A0U1RQW1 187 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 TMEM82A0PJX8 343 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 TRIM64CA6NLI5 447 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 MCRIP1C9JLW8 97 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 AIPO00170 330 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 GEMIN2O14893 280 aaKnown RBP7.53□□□□□ -1.2
NUP54-207ENST00000508583 PSPNO60542 156 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 CA11O75493 328 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 FSHBP01225 129 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 TFF1P04155 84 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 ZNF728P0DKX0 622 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 CD37P11049 281 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 MMP9P14780 707 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 PRTN3P24158 256 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 CFPP27918 469 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 OR3A1P47881 315 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 GP2P55259 537 aaKnown RBP7.53□□□□□ -1.2
NUP54-207ENST00000508583 ATAD3CQ5T2N8 411 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 Q6P435 159 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 IL17RELQ6ZVW7 336 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 VMO1Q7Z5L0 202 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 CROCCP3Q8IVE0 287 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 ZNF565Q8N9K5 539 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 OR4M1Q8NGD0 313 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 NEDD4LQ96PU5 975 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 CHCHD6Q9BRQ6 235 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 DPCDQ9BVM2 203 aaPredicted RBP7.53□□□□□ -1.2
NUP54-207ENST00000508583 CHST6Q9GZX3 395 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 SIRPDQ9H106 197 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 PPIL3Q9H2H8 161 aaKnown RBP7.53□□□□□ -1.2
NUP54-207ENST00000508583 PPA2Q9H2U2 334 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 HEXA-AS1Q9H8Q6 139 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 UNKLQ9H9P5 680 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms