RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SNX4O95219 450 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 GAPDHP04406 335 aaKnown RBP2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 CT62P0C5K7 136 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 SLC35G6P0C7Q6 338 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 IL32P24001 234 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 KDELR1P24390 212 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 CD34P28906 385 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 RPL13AP40429 203 aaKnown RBP2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 RAB38P57729 211 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 BTN3A2P78410 334 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 ERCC8Q13216 396 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 PIGHQ14442 188 aaPredicted RBP2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 ARHGAP19Q14CB8 494 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 BCL2A1Q16548 175 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 KLHL38Q2WGJ6 581 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 ANKRD22Q5VYY1 191 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 C16orf87Q6PH81 154 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 UTS2BQ765I0 119 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 PID1Q7Z2X4 250 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 DEFB108BQ8NET1 73 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 OR8K1Q8NGG5 319 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 OR51F2Q8NH61 342 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 NT5CQ8TCD5 201 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 ABHD3Q8WU67 409 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 YIPF5Q969M3 257 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 SGK3Q96BR1 496 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 HAUS1Q96CS2 278 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 NEURL3Q96EH8 262 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 BIRC8Q96P09 236 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 CLCC1Q96S66 551 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 KCNIP3Q9Y2W7 256 aa2.32□□□□□ -2.04
TOPBP1-206ENST00000508524 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 TMEM223A0PJW6 202 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 M0R1B8 84 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 RAMP3O60896 148 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 CTNSO60931 367 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 REM1O75628 298 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 CBR3O75828 277 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 CCNKO75909 580 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 SMC2O95347 1197 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 COL8A2P25067 703 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 GRIA1P42261 906 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 SSR1P43307 286 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 GPR6P46095 362 aaPredicted RBP2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 SUB1P53999 127 aaKnown RBP eCLIP2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 DEFB121Q5J5C9 76 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 TTC23LQ6PF05 361 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 CYHR1Q6ZMK1 362 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 GALNT10Q86SR1 603 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 PLCZ1Q86YW0 608 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 MREGQ8N565 214 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 ANKFN1Q8N957 763 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 MS4A6EQ96DS6 147 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 QKIQ96PU8 341 aaKnown RBP eCLIP2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 EBNA1BP2Q99848 306 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 TBL1YQ9BQ87 522 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 METTL7AQ9H8H3 244 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 BEX1Q9HBH7 125 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 MRPL47Q9HD33 250 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 UFSP2Q9NUQ7 469 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 TAS2R3Q9NYW6 316 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 RWDD2AQ9UIY3 292 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 ZNF229Q9UJW7 825 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 S4R3C0 116 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 DNAH6Q9C0G6 4158 aa2.31□□□□□ -2.04
TOPBP1-206ENST00000508524 HEATR1Q9H583 2144 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 IGLV1-50A0A075B6I6 118 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 A0A0J9YW62 118 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 OR5H1A6NKK0 313 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 C9JVG2 144 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 TP53I11O14683 189 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 PRMT5O14744 637 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 ERI3O43414 337 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 RP2O75695 350 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 OR4A8P0C604 315 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 DESP17661 470 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 TCN1P20061 433 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 IDH3GP51553 393 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 CTBP2P56545 445 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 REEP5Q00765 189 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 ZNF816Q0VGE8 651 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 STX4Q12846 297 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 CDH17Q12864 832 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 PDK2Q15119 407 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 TMED2Q15363 201 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 AVPI1Q5T686 147 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 TTC23Q5W5X9 447 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 AGTRAPQ6RW13 159 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 LGI3Q8N145 548 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 CEP112Q8N8E3 955 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 PRELID2Q8N945 189 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 WDR31Q8NA23 367 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 OR2M3Q8NG83 312 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 OR10D3Q8NH80 312 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 PYROXD1Q8WU10 500 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 TMEM185BQ9H7F4 350 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 YY1AP1Q9H869 796 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 HMG20AQ9NP66 347 aa2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 MYOZ1Q9NP98 299 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-206ENST00000508524 DKKL1Q9UK85 242 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms