RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 H1FXQ92522 213 aaKnown RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 STMN2Q93045 179 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 LHX4Q969G2 390 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 FGGYQ96C11 551 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 LGALS12Q96DT0 336 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 C9orf16Q9BUW7 83 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ISG20L2Q9H9L3 353 aaKnown RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 RNPEPL1Q9HAU8 725 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ELL3Q9HB65 397 aaPredicted RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 ACOXLQ9NUZ1 547 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ONECUT1Q9UBC0 465 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 NUFIP1Q9UHK0 495 aaKnown RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 ENOPH1Q9UHY7 261 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ENPP5Q9UJA9 477 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 NUP50Q9UKX7 468 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 V9GYS6 101 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 STAB1Q9NY15 2570 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 IGKV1-27A0A075B6S5 117 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 CENPVL3A0A0U1RRI6 287 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 A0A1B0GVI7 797 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 PQLC2LA1A4F0 135 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 RFPL4AA6NLU0 287 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 TMEM210A6NLX4 147 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 A8MXK9 166 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 SRRM5B3KS81 715 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 ZNF879B4DU55 563 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 RFPL4AL1F8VTS6 287 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 TSPAN4O14817 238 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 PHYHO14832 338 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 SYT7O43581 403 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 NDUFB3O43676 98 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 NDUFA2O43678 99 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 WBP4O75554 376 aaKnown RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 MTRF1O75570 445 aaKnown RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 SULT1C4O75897 302 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 DHRS3O75911 302 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 FSTL3O95633 263 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 IGLV3-1P01715 115 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 ACAA1P09110 424 aaPredicted RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 DBTP11182 482 aaKnown RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 ATP6V1B1P15313 513 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 MUC1P15941 1255 aaPredicted RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 GABRB1P18505 474 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 GLRA1P23415 457 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 PAX6P26367 422 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 DUSP1P28562 367 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 PRDX2P32119 198 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 CFHR2P36980 270 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 HAAOP46952 286 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 ETV1P50549 477 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 GTF2A1P52655 376 aaPredicted RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 CAPZA1P52907 286 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 BAMBIQ13145 260 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 TMED1Q13445 227 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 RCN1Q15293 331 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 BAK1Q16611 211 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 DGUOKQ16854 277 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 DEFB112Q30KQ8 113 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 SLC25A30Q5SVS4 291 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 TEX36Q5VZQ5 186 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 STUMQ69YW2 141 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 CALHM1Q8IU99 346 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 PNKDQ8N490 385 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 FTMTQ8N4E7 242 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 ACBD7Q8N6N7 88 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 C11orf44Q8N8P7 122 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 ZNRF1Q8ND25 227 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 OR4M1Q8NGD0 313 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 OR52I1Q8NGK6 324 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 ANGPTL6Q8NI99 470 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 ZNF671Q8TAW3 534 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 CNIH3Q8TBE1 160 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 AQP3Q92482 292 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 RFT1Q96AA3 541 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 TMIGD2Q96BF3 282 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 ADAT3Q96EY9 351 aaPredicted RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 PELI1Q96FA3 418 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 C4orf36Q96KX1 117 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 GAFA1Q96PS6 74 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 SPACA5Q96QH8 159 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 TBX15Q96SF7 602 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 SUCNR1Q9BXA5 334 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 TLNRD1Q9H1K6 362 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 LIN7CQ9NUP9 197 aaKnown RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 OR14J1Q9UGF5 321 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 RPUSD1Q9UJJ7 312 aaKnown RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.71□□□□□ -1.82
NUP54-206ENST00000508465 EXOGQ9Y2C4 368 aaKnown RBP3.71□□□□□ -1.82
NUP54-206ENST00000508465 DOCK11Q5JSL3 2073 aa3.71□□□□□ -1.82
NUP54-206ENST00000508465 NOTCH3Q9UM47 2321 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 TRAV40A0A0B4J280 105 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 IGHV1-69DA0A0B4J2H0 117 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 IGKV1-9A0A0C4DH69 117 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 LOC107986453A0A1B0GWG9 222 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 RPS10-NUDT3A0A1W2PQS6 291 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 OR5B21A6NL26 309 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 OR4C45A6NMZ5 311 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 J3QT63 122 aa3.7□□□□□ -1.82
NUP54-206ENST00000508465 ENSAO43768 121 aaKnown RBP3.7□□□□□ -1.82
NUP54-206ENST00000508465 TSPAN9O75954 239 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms