RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 NDNFQ8TB73 568 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 GPR119Q8TDV5 335 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 TFGQ92734 400 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 CIDECQ96AQ7 238 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 FAM131CQ96AQ9 280 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 CENPNQ96H22 339 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 PYURFQ96I23 114 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 YPEL4Q96NS1 127 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 QKIQ96PU8 341 aaKnown RBP eCLIP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 METTL26Q96S19 204 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 C20orf144Q9BQM9 153 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 TDRD3Q9H7E2 651 aaKnown RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 C12orf4Q9NQ89 552 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 RPRD1BQ9NQG5 326 aaKnown RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 DDX18Q9NVP1 670 aaKnown RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZMAT5Q9UDW3 170 aaKnown RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 CR1P17927 2039 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 TRPM3Q9HCF6 1732 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 ARAP3Q8WWN8 1544 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 LOC100653049A0A140TA62 436 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 LOC389332A0A1B0GUA5 103 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 KNCNA6PVL3 124 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 CD300LBA8K4G0 201 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 E7EWF7 191 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 H0YC42 278 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 M0R1B8 84 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZNF593O00488 134 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 ALOX12BO75342 701 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 KRT34O76011 436 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 RAB36O95755 333 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 SNAI1O95863 264 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 STAG3L2P0CL84 134 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 SCGB1C2P0DMR2 95 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 GTF2F2P13984 249 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 TAC1P20366 129 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 CD9P21926 228 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 TUBG1P23258 451 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 CNTFRP26992 372 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 PSMB9P28065 219 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 ELK4P28324 431 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 IL12BP29460 328 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 GPR4P46093 362 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 XKP51811 444 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 IFFO1Q0D2I5 559 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 TNXAQ16473 311 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 TMEM176BQ3YBM2 270 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 PYCR3Q53H96 274 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 TMEM215Q68D42 235 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZNF767PQ75MW2 155 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR6K2Q8NGY2 324 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR6N2Q8NGY6 317 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR51Q1Q8NH59 317 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 SCGB1C1Q8TD33 95 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 DOK4Q8TEW6 326 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 C22orf15Q8WYQ4 148 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 VAT1Q99536 393 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 TSSK6Q9BXA6 273 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 AICDAQ9GZX7 198 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR2AG1Q9H205 316 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 SLC38A1Q9H2H9 487 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 GAL3ST2Q9H3Q3 398 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 PRORYQ9H606 182 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 CRLF2Q9HC73 371 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 DIABLOQ9NR28 239 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 TUBG2Q9NRH3 451 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 DNAJC27Q9NZQ0 273 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 VAPAQ9P0L0 249 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 ANXA10Q9UJ72 324 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 C14orf166Q9Y224 244 aaKnown RBP0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 KPTNQ9Y664 436 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 V9GYY9 64 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 COL4A1P02462 1669 aa0.69□□□□□ -2.3
HMGB1P29-201ENST00000505659 TRAV8-7A0A075B6U6 113 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 GSTTP1A0A1W2PQM5 241 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 SLC5A10A0PJK1 596 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 F5H5T6 163 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 H3BRN7 92 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 PRMT5O14744 637 aaPredicted RBP0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 GYG2O15488 501 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 ATRNO75882 1429 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 OTCP00480 354 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 RLN2P04090 185 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 COL4A2P08572 1712 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 PRTN3P24158 256 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 HTR2CP28335 458 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 DEKP35659 375 aaKnown RBP0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 DNASE1L1P49184 302 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 GPR176Q14439 515 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 SS18Q15532 418 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 TAL2Q16559 108 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 GLYATQ6IB77 296 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 MARCH3Q86UD3 253 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 PDCL2Q8N4E4 241 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR13C9Q8NGT0 318 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR6K3Q8NGY3 331 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 CASTOR1Q8WTX7 329 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 MITD1Q8WV92 249 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 NELFBQ8WX92 580 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 TOP1MTQ969P6 601 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 KIAA1143Q96AT1 154 aaPredicted RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms