RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 RTN4RL2Q86UN3 420 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 ANKRD13BQ86YJ7 626 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 CD177Q8N6Q3 437 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 OR10A7Q8NGE5 316 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 OR52N4Q8NGI2 321 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 SPATA3Q8NHX4 192 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 KCNG3Q8TAE7 436 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 FAM216AQ8WUB2 273 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 SGCDQ92629 289 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 CORO2AQ92828 525 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 ZNF714Q96N38 554 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 PRDM13Q9H4Q3 707 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 ST3GAL6Q9Y274 331 aa8.13□□□□□ -1.11
NR1I3-220ENST00000505005 TRAV40A0A0B4J280 105 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 A0A1B0GUS0 222 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 MCRIP1C9JLW8 97 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 GABRPO00591 440 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 ZNF737O75373 536 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 SC5DO75845 299 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 HTR3BO95264 441 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 OR2H2O95918 312 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 LALBAP00709 142 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 CRYBA1P05813 215 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 UCHL1P09936 223 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 MMP9P14780 707 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 AMY2BP19961 511 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 MYL9P24844 172 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
NR1I3-220ENST00000505005 LIPKQ5VXJ0 399 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 AWAT2Q6E213 333 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 GDPGP1Q6ZNW5 385 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 VMO1Q7Z5L0 202 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 TRAPPC6BQ86SZ2 158 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 ZNF554Q86TJ5 538 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 OR4D6Q8NGJ1 314 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 OR6M1Q8NGM8 313 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 OR5R1Q8NH85 324 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 ZNF596Q8TC21 504 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 SSMEM1Q8WWF3 244 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 RGP1Q92546 391 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-220ENST00000505005 ZNF488Q96MN9 340 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 OR5M11Q96RB7 305 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 URM1Q9BTM9 101 aaKnown RBP8.12□□□□□ -1.11
NR1I3-220ENST00000505005 TMED9Q9BVK6 235 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 RAB18Q9NP72 206 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 RBFOX1Q9NWB1 397 aaKnown RBP8.12□□□□□ -1.11
NR1I3-220ENST00000505005 RSL24D1Q9UHA3 163 aaKnown RBP8.12□□□□□ -1.11
NR1I3-220ENST00000505005 MRPS28Q9Y2Q9 187 aaKnown RBP8.12□□□□□ -1.11
NR1I3-220ENST00000505005 TBL2Q9Y4P3 447 aaKnown RBP8.12□□□□□ -1.11
NR1I3-220ENST00000505005 SIRT4Q9Y6E7 314 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-220ENST00000505005 CEPT1Q9Y6K0 416 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 ZFHX3Q15911 3703 aa8.12□□□□□ -1.11
NR1I3-220ENST00000505005 TRAV1-2A0A0B4J238 106 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 A0A0G2JK05 382 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 CENPVL3A0A0U1RRI6 287 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 PNMA8CA0A1B0GUJ8 204 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 ZNF729A6NN14 1252 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-220ENST00000505005 RNF212BA8MTL3 300 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 C17orf98A8MV24 154 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 ANGPTL7O43827 346 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 GABARAPO95166 117 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 AVPP01185 164 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 MAS1P04201 325 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 PSMB9P28065 219 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 HTR2CP28335 458 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 CEACAM3P40198 252 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 NPBWR2P48146 333 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 PRRX1P54821 245 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 P2RX3P56373 397 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 BAMBIQ13145 260 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 PAN3Q58A45 887 aaKnown RBP8.11□□□□□ -1.11
NR1I3-220ENST00000505005 DMRTC1Q5HYR2 192 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 KRBOX4Q5JUW0 171 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 TMEM200BQ69YZ2 307 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 LIAT1Q6ZQX7 453 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 C1orf229Q6ZS94 237 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-220ENST00000505005 IL17RELQ6ZVW7 336 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 TPRA1Q86W33 373 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 PHC2Q8IXK0 858 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 ZFP41Q8N8Y5 198 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 OR5D18Q8NGL1 313 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 TNFRSF14Q92956 283 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 LHX4Q969G2 390 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 RFT1Q96AA3 541 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 ISOC1Q96CN7 298 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 YIPF6Q96EC8 236 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 SEH1LQ96EE3 360 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 RIMS4Q9H426 269 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-220ENST00000505005 PTTG2Q9NZH5 202 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 MGAT4AQ9UM21 535 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 SSR3Q9UNL2 185 aa8.11□□□□□ -1.11
NR1I3-220ENST00000505005 ARHGAP32A7KAX9 2087 aa8.1□□□□□ -1.11
NR1I3-220ENST00000505005 TRDV1A0A1B0GX56 115 aa8.1□□□□□ -1.11
NR1I3-220ENST00000505005 SLC22A1O15245 554 aa8.1□□□□□ -1.11
NR1I3-220ENST00000505005 SCGNO76038 276 aa8.1□□□□□ -1.11
NR1I3-220ENST00000505005 OR7C1O76099 320 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-220ENST00000505005 LPLP06858 475 aa8.1□□□□□ -1.11
NR1I3-220ENST00000505005 SFTPBP07988 381 aa8.1□□□□□ -1.11
NR1I3-220ENST00000505005 CD37P11049 281 aa8.1□□□□□ -1.11
NR1I3-220ENST00000505005 SERPINA2P20848 420 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms