RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 ING3Q9NXR8 418 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 ZFHX3Q15911 3703 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 DOCK11Q5JSL3 2073 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 hADV38S2A0JD32 116 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 CRTAPO75718 401 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-210ENST00000498739 OR7C1O76099 320 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-210ENST00000498739 GALP22466 123 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 MYL9P24844 172 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 HTR2CP28335 458 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 ERP29P30040 261 aaKnown RBP13.76□□□□□ -0.21
PRKCB-210ENST00000498739 P2RX3P56373 397 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 AESQ08117 197 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 PAN3Q58A45 887 aaKnown RBP13.76□□□□□ -0.21
PRKCB-210ENST00000498739 C22orf42Q6IC83 251 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 C1orf122Q6ZSJ8 110 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 LINC00596Q86U02 117 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 BCL6BQ8N143 479 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-210ENST00000498739 OR6M1Q8NGM8 313 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 ZNF418Q8TF45 676 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-210ENST00000498739 MRPS24Q96EL2 167 aaKnown RBP13.76□□□□□ -0.21
PRKCB-210ENST00000498739 GFI1Q99684 422 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 BANF2Q9H503 90 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 ZNF696Q9H7X3 374 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 METTL8Q9H825 291 aaKnown RBP13.76□□□□□ -0.21
PRKCB-210ENST00000498739 PLGRKTQ9HBL7 147 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 VCX3AQ9NNX9 186 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 ZNF581Q9P0T4 197 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 GHRLQ9UBU3 117 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 STUB1Q9UNE7 303 aa13.76□□□□□ -0.21
PRKCB-210ENST00000498739 TRAV24A0A0B4J272 114 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 FUOMA2VDF0 154 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 TCF21O43680 179 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 CSN2P05814 226 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 UBBP0CG47 229 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 MGMTP16455 207 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 MEF2CQ06413 473 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-210ENST00000498739 KLRD1Q13241 179 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 TAF9Q16594 264 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 MPV17LQ2QL34 196 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 KRBOX4Q5JUW0 171 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 ATAD3CQ5T2N8 411 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 METAP1DQ6UB28 335 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-210ENST00000498739 TCF23Q7RTU1 214 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 TRAPPC6BQ86SZ2 158 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 TMEM104Q8NE00 496 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 FAM46BQ96A09 425 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 SUCNR1Q9BXA5 334 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 SELENOIQ9C0D9 397 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 CST11Q9H112 138 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 SOX21Q9Y651 276 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-210ENST00000498739 LINC00312Q9Y6C7 94 aa13.75□□□□□ -0.21
PRKCB-210ENST00000498739 IGHV1-69DA0A0B4J2H0 117 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 hCG_1809904A0A1W2PP81 198 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 A0A1W2PPE2 198 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 A0A1W2PR64 198 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 A0A1W2PRV1 198 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 RNASEK-C17orf49H0YIS7 233 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 PDCD5O14737 125 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 SLC22A1O15245 554 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 MPIG6BO95866 241 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 IGHV1-69P01742 117 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 ZNF728P0DKX0 622 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 PRTN3P24158 256 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 GLIPR1P48060 266 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 BPIFB3P59826 476 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 ERVFRD-1P60508 538 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 C9orf139Q6ZV77 190 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 SUMF2Q8NBJ7 301 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 TNFRSF14Q92956 283 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 COQ2Q96H96 371 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 ZNF714Q96N38 554 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 DPCDQ9BVM2 203 aaPredicted RBP13.74□□□□□ -0.21
PRKCB-210ENST00000498739 OR51E2Q9H255 320 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 KCNK15Q9H427 330 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 IFT22Q9H7X7 185 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 TXNL4BQ9NX01 149 aaKnown RBP13.74□□□□□ -0.21
PRKCB-210ENST00000498739 SSR3Q9UNL2 185 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 V9GY05 133 aa13.74□□□□□ -0.21
PRKCB-210ENST00000498739 TRAV1-2A0A0B4J238 106 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 A0A1W2PRD5 423 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 A0A1W2PRF3 423 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 A0A1W2PRM7 423 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 SHISA3A0PJX4 238 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 C17orf98A8MV24 154 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 SLC17A2O00624 439 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 VSIG8P0DPA2 414 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 CD37P11049 281 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 CD36P16671 472 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 DLX6P56179 175 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 SRSF2Q01130 221 aaKnown RBP13.73□□□□□ -0.21
PRKCB-210ENST00000498739 GUCA2AQ02747 115 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 P2RY14Q15391 338 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 RAB11BQ15907 218 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 NCR3LG1Q68D85 454 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 OR10K2Q6IF99 312 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 ZNF782Q6ZMW2 699 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-210ENST00000498739 C11orf42Q8N5U0 333 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 SIGLECL1Q8N7X8 197 aa13.73□□□□□ -0.21
PRKCB-210ENST00000498739 PLPPR1Q8TBJ4 325 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms