RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FLOT2Q14254 428 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 ZNF235Q14590 738 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 ANGPT1Q15389 498 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 LDLRAD2Q5SZI1 272 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 ERICH5Q6P6B1 374 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 USP50Q70EL3 339 aaPredicted RBP2.09□□□□□ -2.07
SMC4-225ENST00000497203 DPPA2Q7Z7J5 298 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 C10orf107Q8IVU9 208 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 RPRMLQ8N4K4 120 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 C3orf22Q8N5N4 141 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 LINC00304Q8N9R0 145 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 OR2AE1Q8NHA4 323 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 SERPINB11Q96P15 392 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 PLA2G12AQ9BZM1 189 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 OR52A5Q9H2C5 316 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 POMKQ9H5K3 350 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 TREM1Q9NP99 234 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 RBM12B-AS1Q9P1G2 102 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 ZNF492Q9P255 531 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 POFUT2Q9Y2G5 429 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 TRAV8-3A0A0A6YYJ7 113 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 IGHV3-43A0A0B4J1X8 118 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 D6RAR5 112 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 M0QXV9 152 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 ENTPD6O75354 484 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 SNAP29O95721 258 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 HLA-AP01891 365 aaKnown RBP2.08□□□□□ -2.08
SMC4-225ENST00000497203 NQO2P16083 231 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 M6PRP20645 277 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 CASQ1P31415 396 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 CBX5P45973 191 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 RAB25P57735 213 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 SYCP1Q15431 976 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 NXNL2Q5VZ03 156 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 FAM183BPQ6ZVS7 135 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 CPNE9Q8IYJ1 553 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 FAM45AQ8TCE6 357 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 PHF10Q8WUB8 498 aaKnown RBP2.08□□□□□ -2.08
SMC4-225ENST00000497203 OR5P2Q8WZ92 322 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 OLFM3Q96PB7 478 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 ABCG5Q9H222 651 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 DSN1Q9H410 356 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 DUSP21Q9H596 190 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 SNX24Q9Y343 169 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 FADS3Q9Y5Q0 445 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 ABCB11O95342 1321 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 NUP205Q92621 2012 aa2.08□□□□□ -2.08
SMC4-225ENST00000497203 BAZ1BQ9UIG0 1483 aaKnown RBP2.07□□□□□ -2.08
SMC4-225ENST00000497203 IGHV2-26A0A0B4J1V2 119 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 TRAV8-2A0A0B4J237 113 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 A0A1B0GTI1 187 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 ERICH2A1L162 156 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 ZNF233A6NK53 670 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 C4orf51C9J302 202 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 F5H5P2 479 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 H3BP45 60 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 ISLRO14498 428 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 SGCEO43556 437 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 PDCD6O75340 191 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 ZNF35P13682 527 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 GTF2F2P13984 249 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 CNTFRP26992 372 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 TSPOP30536 169 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 PYCR1P32322 319 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 UGT2B10P36537 528 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 PRDX1Q06830 199 aaKnown RBP2.07□□□□□ -2.08
SMC4-225ENST00000497203 ZNF660Q6AZW8 331 aaPredicted RBP2.07□□□□□ -2.08
SMC4-225ENST00000497203 COMTD1Q86VU5 262 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 BPIFB6Q8NFQ5 453 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 OR2M3Q8NG83 312 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 RORBQ92753 470 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 PPWD1Q96BP3 646 aaKnown RBP2.07□□□□□ -2.08
SMC4-225ENST00000497203 PYURFQ96I23 114 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 LINC01587Q99440 93 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 ACBD6Q9BR61 282 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 TM2D3Q9BRN9 247 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 ULBP1Q9BZM6 244 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 TXNIPQ9H3M7 391 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 MFSD1Q9H3U5 465 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 ZBED9Q6R2W3 1325 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 PLXNB3Q9ULL4 1909 aa2.07□□□□□ -2.08
SMC4-225ENST00000497203 IGKV3D-11A0A0A0MRZ8 115 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 ERICH4A6NGS2 130 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 FAM183AA6NL82 134 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 H3BQ85 93 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 TCF21O43680 179 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 CA2P00918 260 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 NPPAP01160 153 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 IGHV3-53P01767 116 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 IGKV5-2P06315 115 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 AKR1C4P17516 323 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 PLTPP55058 493 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 AQP5P55064 265 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 KLF3P57682 345 aaPredicted RBP2.06□□□□□ -2.08
SMC4-225ENST00000497203 BAMBIQ13145 260 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 TPBGQ13641 420 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 TMEM249Q2WGJ8 235 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 FAM162BQ5T6X4 162 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms