RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 PPA2Q9H2U2 334 aa18.61■□□□□ 0.57
CHRD-217ENST00000496527 ACOT13Q9NPJ3 140 aa18.61■□□□□ 0.57
CHRD-217ENST00000496527 MRPS28Q9Y2Q9 187 aaKnown RBP18.61■□□□□ 0.57
CHRD-217ENST00000496527 SF3B6Q9Y3B4 125 aaKnown RBP18.61■□□□□ 0.57
CHRD-217ENST00000496527 A0A1W2PRD5 423 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 A0A1W2PRF3 423 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 A0A1W2PRM7 423 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 MEX3AA1L020 520 aaKnown RBP18.6■□□□□ 0.57
CHRD-217ENST00000496527 DNAJC9-AS1A6NH13 148 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 PSMA1P25786 263 aaKnown RBP18.6■□□□□ 0.57
CHRD-217ENST00000496527 UBE2E1P51965 193 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 P2RX3P56373 397 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 UBA52P62987 128 aaKnown RBP18.6■□□□□ 0.57
CHRD-217ENST00000496527 GPR176Q14439 515 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 PIGYQ3MUY2 71 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 SLC22A6Q4U2R8 563 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 HSD17B12Q53GQ0 312 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 FAM27D1Q5T7N8 215 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 OSR2Q8N2R0 312 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 PIP4P2Q8N4L2 257 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 SVOPQ8N4V2 548 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 C11orf42Q8N5U0 333 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 PRDM13Q9H4Q3 707 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 HEXA-AS1Q9H8Q6 139 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 ST3GAL6Q9Y274 331 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 FAM96BQ9Y3D0 163 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 LINC00312Q9Y6C7 94 aa18.6■□□□□ 0.57
CHRD-217ENST00000496527 NPFFO15130 113 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 SC5DO75845 299 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 DLX6P56179 175 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 ERVFRD-1P60508 538 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 RPS25P62851 125 aaKnown RBP18.59■□□□□ 0.57
CHRD-217ENST00000496527 EMX1Q04741 257 aaPredicted RBP18.59■□□□□ 0.57
CHRD-217ENST00000496527 AWAT2Q6E213 333 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 GLIPR1L1Q6UWM5 242 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.59■□□□□ 0.57
CHRD-217ENST00000496527 FAM216AQ8WUB2 273 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 PHYHIPQ92561 330 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 ZNF714Q96N38 554 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 DUX5Q96PT3 197 aa18.59■□□□□ 0.57
CHRD-217ENST00000496527 ZMAT3Q9HA38 289 aaKnown RBP18.59■□□□□ 0.57
CHRD-217ENST00000496527 A0A0U1RQK1 487 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 C17orf98A8MV24 154 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 CSN2P05814 226 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 UCHL1P09936 223 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 GTF2F2P13984 249 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 SRMP19623 302 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 GP2P55259 537 aaKnown RBP18.58■□□□□ 0.56
CHRD-217ENST00000496527 AESQ08117 197 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 PAN3Q58A45 887 aaKnown RBP18.58■□□□□ 0.56
CHRD-217ENST00000496527 NHLRC3Q5JS37 347 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 TRAPPC6BQ86SZ2 158 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 SPATA3Q8NHX4 192 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 UQCC2Q9BRT2 126 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 SLITRK2Q9H156 845 aa18.58■□□□□ 0.56
CHRD-217ENST00000496527 TRAV24A0A0B4J272 114 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 HSPB6O14558 160 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 RBP4P02753 201 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 RBM11P57052 281 aaKnown RBP18.57■□□□□ 0.56
CHRD-217ENST00000496527 SLC9A3R2Q15599 337 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 KRBOX4Q5JUW0 171 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 GLT8D1Q68CQ7 371 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 HCP5Q6MZN7 132 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 Q6YL49 198 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 ZNF782Q6ZMW2 699 aaPredicted RBP18.57■□□□□ 0.56
CHRD-217ENST00000496527 TMEM91Q6ZNR0 172 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 TCF23Q7RTU1 214 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 PNKDQ8N490 385 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 OR4D6Q8NGJ1 314 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 SLC25A28Q96A46 364 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 FOXRED1Q96CU9 486 aaPredicted RBP18.57■□□□□ 0.56
CHRD-217ENST00000496527 C1orf147Q96MC9 270 aaPredicted RBP18.57■□□□□ 0.56
CHRD-217ENST00000496527 ING3Q9NXR8 418 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 UBE2J1Q9Y385 318 aaPredicted RBP18.57■□□□□ 0.56
CHRD-217ENST00000496527 LRRC42Q9Y546 428 aa18.57■□□□□ 0.56
CHRD-217ENST00000496527 TRGV10A0A0A0MS01 117 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 MEIOCA2RUB1 952 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 CLDN34H7C241 214 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 HOXA3O43365 443 aaPredicted RBP18.56■□□□□ 0.56
CHRD-217ENST00000496527 OR7C1O76099 320 aaPredicted RBP18.56■□□□□ 0.56
CHRD-217ENST00000496527 GABRA5P31644 462 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 GLIPR1P48060 266 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 ACTG1P63261 375 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 ATXN7L3Q14CW9 347 aaPredicted RBP18.56■□□□□ 0.56
CHRD-217ENST00000496527 LINC00596Q86U02 117 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 LRRTM1Q86UE6 522 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 LYPD6Q86Y78 171 aa18.56■□□□□ 0.56
CHRD-217ENST00000496527 PPIL3Q9H2H8 161 aaKnown RBP18.56■□□□□ 0.56
CHRD-217ENST00000496527 A0A1W2PP11 408 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 GEMIN2O14893 280 aaKnown RBP18.55■□□□□ 0.56
CHRD-217ENST00000496527 ARL6IP5O75915 188 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 MELTFP08582 738 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 FBP1P09467 338 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 COX7A1P24310 79 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 SAA4P35542 130 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 SPARTQ8N0X7 666 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 MRPS24Q96EL2 167 aaKnown RBP18.55■□□□□ 0.56
CHRD-217ENST00000496527 COQ2Q96H96 371 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 BARHL1Q9BZE3 327 aa18.55■□□□□ 0.56
CHRD-217ENST00000496527 IFT22Q9H7X7 185 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms