RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 EDDM3BP56851 147 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 LSM3P62310 102 aaKnown RBP14.15□□□□□ -0.14
HDAC6-235ENST00000495515 RPL31P62899 125 aaKnown RBP14.15□□□□□ -0.14
HDAC6-235ENST00000495515 MXD1Q05195 221 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 FAM189A2Q15884 450 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 TAF9Q16594 264 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 PAN3Q58A45 887 aaKnown RBP14.15□□□□□ -0.14
HDAC6-235ENST00000495515 ANKRD13BQ86YJ7 626 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 CROCCP3Q8IVE0 287 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 CMTM4Q8IZR5 234 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 FGFRL1Q8N441 504 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 TMEM104Q8NE00 496 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 OR51D1Q8NGF3 324 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 DACT3Q96B18 629 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-235ENST00000495515 CHST6Q9GZX3 395 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 SHARPINQ9H0F6 387 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 RNF167Q9H6Y7 350 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 AUP1Q9Y679 476 aa14.15□□□□□ -0.14
HDAC6-235ENST00000495515 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.15□□□□□ -0.143e-6■□□□□ 11
HDAC6-235ENST00000495515 HIVEP2P31629 2446 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 TMEM14DPA8MWL7 114 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 TMEM127O75204 238 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 CSN2P05814 226 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 ERP29P30040 261 aaKnown RBP14.14□□□□□ -0.15
HDAC6-235ENST00000495515 OR3A1P47881 315 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 CLDN12P56749 244 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 PAX8Q06710 450 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 EDDM3AQ14507 147 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 PDCD1Q15116 288 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 C2orf76Q3KRA6 126 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 ATAD3CQ5T2N8 411 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 GPR107Q5VW38 600 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 FAM185AQ8N0U4 392 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 LY6G5BQ8NDX9 201 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 OR4S1Q8NGB4 309 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 Q96M66 194 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 BARHL1Q9BZE3 327 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 PPA2Q9H2U2 334 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 FBLN5Q9UBX5 448 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 CDC42EP3Q9UKI2 254 aa14.14□□□□□ -0.15
HDAC6-235ENST00000495515 ZNF469Q96JG9 3925 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-235ENST00000495515 TRAV24A0A0B4J272 114 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 hADV38S2A0JD32 116 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 SMIM30A4D0T7 59 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 GABARAPO95166 117 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 IL1AP01583 271 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 RPS27AP62979 156 aaKnown RBP14.13□□□□□ -0.15
HDAC6-235ENST00000495515 QRFPP83859 136 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 MEF2CQ06413 473 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-235ENST00000495515 BLMHQ13867 455 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 RBM39Q14498 530 aaKnown RBP14.13□□□□□ -0.15
HDAC6-235ENST00000495515 FAM120AOSQ5T036 256 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 METTL11BQ5VVY1 283 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 OR10K2Q6IF99 312 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 SFXN4Q6P4A7 337 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 DPCDQ9BVM2 203 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-235ENST00000495515 BEX2Q9BXY8 128 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 TMPRSS13Q9BYE2 586 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 LIN7BQ9HAP6 207 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 DAPK2Q9UIK4 370 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 RAB22AQ9UL26 194 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 KPTNQ9Y664 436 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 TLN2Q9Y4G6 2542 aa14.13□□□□□ -0.15
HDAC6-235ENST00000495515 SETD2Q9BYW2 2564 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-235ENST00000495515 YLPM1P49750 1951 aaKnown RBP14.13□□□□□ -0.15
HDAC6-235ENST00000495515 ABCA2Q9BZC7 2435 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 hCG_1809904A0A1W2PP81 198 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 A0A1W2PPE2 198 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 A0A1W2PR64 198 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 A0A1W2PRV1 198 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 MCRIP1C9JLW8 97 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 INAFM1C9JVW0 142 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 GLAP06280 429 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 FUT3P21217 361 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 P2RX3P56373 397 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 UNC119Q13432 240 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 NR2C2APQ86WQ0 139 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 KIR3DL3Q8N743 410 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 SUMF2Q8NBJ7 301 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 OR4M1Q8NGD0 313 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 NEK7Q8TDX7 302 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 NEDD4LQ96PU5 975 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 TM2D1Q9BX74 207 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 C19orf12Q9NSK7 152 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 ONECUT1Q9UBC0 465 aa14.12□□□□□ -0.15
HDAC6-235ENST00000495515 ZANQ9Y493 2812 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 HSPB6O14558 160 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 NOL3O60936 208 aaKnown RBP14.11□□□□□ -0.15
HDAC6-235ENST00000495515 PDCD6O75340 191 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 CLEC2LP0C7M8 214 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 SRP14P37108 136 aaKnown RBP14.11□□□□□ -0.15
HDAC6-235ENST00000495515 SERPINB10P48595 397 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 VBP1P61758 197 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 NCS1P62166 190 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 ARF6P62330 175 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 ATXN7L3Q14CW9 347 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-235ENST00000495515 CHRFAM7AQ494W8 412 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 KRBOX4Q5JUW0 171 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 RAB12Q6IQ22 244 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 C1orf122Q6ZSJ8 110 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms