RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 COPS4Q9BT78 406 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 DCTN5Q9BTE1 182 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 MMP28Q9H239 520 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 OR52D1Q9H346 318 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 SP140LQ9H930 580 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 RNPEPL1Q9HAU8 725 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 ELL3Q9HB65 397 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 PRPF19Q9UMS4 504 aaKnown RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 RHBDD3Q9Y3P4 386 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 MAB21L2Q9Y586 359 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 TENM3Q9P273 2699 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 BBIP1A8MTZ0 92 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 NME4O00746 187 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 ARPC3O15145 178 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 ANGPTL7O43827 346 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 CHST1O43916 411 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 GYPBP06028 91 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 IGLL1P15814 213 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 SLC6A6P31641 620 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 OTX1P32242 354 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-219ENST00000494323 NAA10P41227 235 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-219ENST00000494323 GABRA2P47869 451 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 GSK3BP49841 420 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 SLC7A2P52569 658 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 FAM3AP98173 230 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 EMX1Q04741 257 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-219ENST00000494323 RELQ04864 619 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-219ENST00000494323 PLA2G7Q13093 441 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 MAPRE2Q15555 327 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 DGUOKQ16854 277 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 DMRTC1Q5HYR2 192 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 GLYATQ6IB77 296 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 HCP5Q6MZN7 132 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 DRAM2Q6UX65 266 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 CCBE1Q6UXH8 406 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-219ENST00000494323 SLC16A9Q7RTY1 509 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 FAM219AQ8IW50 185 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 GBGT1Q8N5D6 347 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 FAM86B1Q8N7N1 296 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 ZNRF1Q8ND25 227 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 PROKR2Q8NFJ6 384 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 OR51G2Q8NGK0 314 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 OR4C13Q8NGP0 309 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 OR5M8Q8NGP6 311 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 OR2T6Q8NHC8 308 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 FANK1Q8TC84 345 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 PIFOQ8TCI5 191 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 RPL3LQ92901 407 aaKnown RBP4.14□□□□□ -1.75
PTCD3-219ENST00000494323 SLAMF6Q96DU3 332 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 REEP6Q96HR9 211 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 C7orf34Q96L11 122 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 SIKE1Q9BRV8 207 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 ANKRD19PQ9H560 264 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 EGLN3Q9H6Z9 239 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 METTL8Q9H825 291 aaKnown RBP4.14□□□□□ -1.75
PTCD3-219ENST00000494323 NECAP2Q9NVZ3 263 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF319Q9P2F9 582 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 NOP16Q9Y3C1 178 aaKnown RBP4.14□□□□□ -1.75
PTCD3-219ENST00000494323 V9GYQ6 96 aa4.14□□□□□ -1.75
PTCD3-219ENST00000494323 COL7A1Q02388 2944 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 IGKV2D-30A0A075B6S6 120 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 A0A1W2PPK0 400 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 C5orf52A6NGY3 159 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 OR2AT4A6NND4 320 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF850A8MQ14 1090 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 K7EIL1 84 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 IDH3BO43837 385 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 XPNPEP2O43895 674 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 RHBDL1O75783 438 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 GADD45GO95257 159 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 CSN3P07498 182 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 CLUP10909 449 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 COX4I1P13073 169 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 HOXB6P17509 224 aaKnown RBP4.13□□□□□ -1.75
PTCD3-219ENST00000494323 FMO3P31513 532 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 DDOSTP39656 456 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 CX3CR1P49238 355 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 LRRC75BQ2VPJ9 315 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 STUMQ69YW2 141 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 CGB2Q6NT52 195 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 KCTD8Q6ZWB6 473 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 C16orf82Q7Z2V1 217 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 LHFPL4Q7Z7J7 247 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 MKXQ8IYA7 352 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 DYNAPQ8N1N2 210 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 RNF148Q8N7C7 305 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 ANGPTL6Q8NI99 470 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 C8orf46Q8TAG6 207 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 PIGCQ92535 297 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 MOB3AQ96BX8 217 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 RNF170Q96K19 258 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 GAFA1Q96PS6 74 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 HOPXQ9BPY8 73 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-219ENST00000494323 KCTD14Q9BQ13 255 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-219ENST00000494323 PAPOLGQ9BWT3 736 aaKnown RBP4.13□□□□□ -1.75
PTCD3-219ENST00000494323 YY1AP1Q9H869 796 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 EFCAB1Q9HAE3 211 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 DCAF13Q9NV06 445 aaKnown RBP4.13□□□□□ -1.75
PTCD3-219ENST00000494323 FGFR1OP2Q9NVK5 253 aa4.13□□□□□ -1.75
PTCD3-219ENST00000494323 DNAJC27Q9NZQ0 273 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms