RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ABCG5Q9H222 651 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 RIMS4Q9H426 269 aaPredicted RBP12.44□□□□□ -0.42
ACTB-213ENST00000493945 IL36RNQ9UBH0 155 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 HSF4Q9ULV5 492 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 IGHV4-61A0A0C4DH41 118 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 hCG_1809904A0A1W2PP81 198 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 A0A1W2PPE2 198 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 A0A1W2PR64 198 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 A0A1W2PRV1 198 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 B4DSR2 109 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 RNF223E7ERA6 249 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 SLC33A1O00400 549 aaPredicted RBP12.43□□□□□ -0.42
ACTB-213ENST00000493945 DVL1O14640 695 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 WNT2P09544 360 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 PITPNAQ00169 270 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 BTNL3Q6UXE8 466 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 FAM89BQ8N5H3 189 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 SUMF2Q8NBJ7 301 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 H1FXQ92522 213 aaKnown RBP12.43□□□□□ -0.42
ACTB-213ENST00000493945 SEH1LQ96EE3 360 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 DMRTB1Q96MA1 342 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 SLIRPQ9GZT3 109 aaKnown RBP12.43□□□□□ -0.42
ACTB-213ENST00000493945 KCNK15Q9H427 330 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 ETAA1Q9NY74 926 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 RCC2Q9P258 522 aaKnown RBP12.43□□□□□ -0.42
ACTB-213ENST00000493945 MGAT4AQ9UM21 535 aa12.43□□□□□ -0.42
ACTB-213ENST00000493945 A0A1W2PQ09 198 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 hADV38S2A0JD32 116 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 TMEM30CPA0ZSE6 113 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 POM121CA8CG34 1229 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 A8MXK9 166 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 ENSAO43768 121 aaKnown RBP12.42□□□□□ -0.42
ACTB-213ENST00000493945 CLPXO76031 633 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 TPPPO94811 219 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 LIPFP07098 398 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
ACTB-213ENST00000493945 CD3GP09693 182 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 ERP29P30040 261 aaKnown RBP12.42□□□□□ -0.42
ACTB-213ENST00000493945 CEBPDP49716 269 aaPredicted RBP12.42□□□□□ -0.42
ACTB-213ENST00000493945 EDDM3BP56851 147 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 WDR25Q64LD2 544 aaPredicted RBP12.42□□□□□ -0.42
ACTB-213ENST00000493945 Q6P435 159 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 TRAT1Q6PIZ9 186 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 MOB1BQ7L9L4 216 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 CMTM4Q8IZR5 234 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 ZNRF1Q8ND25 227 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 WFDC11Q8NEX6 87 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 PPA2Q9H2U2 334 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 CHMP1AQ9HD42 196 aaPredicted RBP12.42□□□□□ -0.42
ACTB-213ENST00000493945 PTTG2Q9NZH5 202 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 OR6C3Q9NZP0 311 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 MAB21L2Q9Y586 359 aa12.42□□□□□ -0.42
ACTB-213ENST00000493945 TRGV10A0A0A0MS01 117 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 HSPB6O14558 160 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 TNFRSF13BO14836 293 aaPredicted RBP12.41□□□□□ -0.42
ACTB-213ENST00000493945 ZNF737O75373 536 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 HIST1H1DP16402 221 aaKnown RBP12.41□□□□□ -0.42
ACTB-213ENST00000493945 GATA3P23771 443 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 CHATP28329 748 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 P2RX3P56373 397 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 PAX5Q02548 391 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 MEF2CQ06413 473 aaPredicted RBP12.41□□□□□ -0.42
ACTB-213ENST00000493945 ARFRP1Q13795 201 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 EDDM3AQ14507 147 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 PNLIPRP3Q17RR3 467 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 KRBOX4Q5JUW0 171 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 LYPD2Q6UXB3 125 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 TRAPPC6BQ86SZ2 158 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 GLCCI1Q86VQ1 547 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 KRTAP1-3Q8IUG1 177 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 TEX29Q8N6K0 151 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 LINC01356Q8N9X3 169 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 OR5H6Q8NGV6 325 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 NICN1Q9BSH3 213 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 CHST6Q9GZX3 395 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 NCOR1P1Q9H4R4 102 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 C12orf4Q9NQ89 552 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 NBPF19A0A087WUL8 3843 aa12.41□□□□□ -0.42
ACTB-213ENST00000493945 LOC105371242A0A075B767 164 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 TRAV24A0A0B4J272 114 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 TRAV20A0A0B4J274 112 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 XRCC3O43542 346 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 HPGDSO60760 199 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 OR3A1P47881 315 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 EFNB2P52799 333 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 GNG2P59768 71 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 LMO4P61968 165 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 RPL31P62899 125 aaKnown RBP12.4□□□□□ -0.42
ACTB-213ENST00000493945 HOXA4Q00056 320 aaPredicted RBP12.4□□□□□ -0.42
ACTB-213ENST00000493945 ATXN7L3Q14CW9 347 aaPredicted RBP12.4□□□□□ -0.42
ACTB-213ENST00000493945 SPANXN2Q5MJ10 180 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 C6orf183Q5T699 404 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 FOXB2Q5VYV0 432 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 SLC35E4Q6ICL7 350 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 SPNS3Q6ZMD2 512 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 LINC00299Q6ZSB3 139 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 ZNF565Q8N9K5 539 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 SLC25A38Q96DW6 304 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 DIRAS2Q96HU8 199 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms