RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 KCNG3Q8TAE7 436 aa14.77□□□□□ -0.04
PDLIM7-208ENST00000493815 Q96M66 194 aa14.77□□□□□ -0.04
PDLIM7-208ENST00000493815 DCTN5Q9BTE1 182 aa14.77□□□□□ -0.04
PDLIM7-208ENST00000493815 TMEM59Q9BXS4 323 aa14.77□□□□□ -0.04
PDLIM7-208ENST00000493815 SEBOXQ9HB31 216 aaPredicted RBP14.77□□□□□ -0.04
PDLIM7-208ENST00000493815 TMEM14DPA8MWL7 114 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 GABARAPO95166 117 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 AVPP01185 164 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 LMO1P25800 156 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 SERPINB10P48595 397 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 ATXN7L3Q14CW9 347 aaPredicted RBP14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 CR1LQ2VPA4 569 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 PAN3Q58A45 887 aaKnown RBP14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 ATAD3CQ5T2N8 411 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 MRPS24Q96EL2 167 aaKnown RBP14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 NICN1Q9BSH3 213 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 FAM234AQ9H0X4 552 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 INSIG2Q9Y5U4 225 aa14.77□□□□□ -0.05
PDLIM7-208ENST00000493815 HIVEP2P31629 2446 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 KIR2DS1A0A191URI9 304 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 TMEM272A0A1B0GTI8 110 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 INAFM1C9JVW0 142 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 ENSAO43768 121 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 EFNB2P52799 333 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 RPL31P62899 125 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 GDPD3Q7L5L3 318 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 FAM185AQ8N0U4 392 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 SUMF2Q8NBJ7 301 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 CHST4Q8NCG5 386 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 TMPRSS13Q9BYE2 586 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 C7orf69Q9H7B7 122 aa14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 ANK3Q12955 4377 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-208ENST00000493815 PPIAL4CA0A0B4J2A2 164 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 A0A1W2PQ09 198 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 GPR37O15354 613 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 ECDO95905 644 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 PAHP00439 452 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 PPIAL4GP0DN37 164 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 SNRPBP14678 240 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 CFPP27918 469 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 RPS27AP62979 156 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 AESQ08117 197 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 IDNKQ5T6J7 187 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 SIGIRRQ6IA17 410 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 BTNL3Q6UXE8 466 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 C1orf229Q6ZS94 237 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 RTN4RL2Q86UN3 420 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 NDNFQ8TB73 568 aa14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 DPCDQ9BVM2 203 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-208ENST00000493815 A0A0A6YYD4 124 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 LDLRAD4O15165 306 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 ARF6P62330 175 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 MPV17LQ2QL34 196 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 OR2W3Q7Z3T1 314 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 LINC00596Q86U02 117 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 LY6G5BQ8NDX9 201 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 OR5D13Q8NGL4 314 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 LPAR5Q9H1C0 372 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 ONECUT1Q9UBC0 465 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 MGST3O14880 152 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 GLIPR1P48060 266 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 DLX1P56177 255 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 PRB3Q04118 309 aaPredicted RBP14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 PAX8Q06710 450 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 NKAPLQ5M9Q1 402 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 FAM120AOSQ5T036 256 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 TMEM200BQ69YZ2 307 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 RAB12Q6IQ22 244 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 LURAP1LQ8IV03 231 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 PPP1R35Q8TAP8 253 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 PLPPR1Q8TBJ4 325 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 COQ2Q96H96 371 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 IFT22Q9H7X7 185 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 OPN4Q9UHM6 478 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 PEX16Q9Y5Y5 336 aa14.74□□□□□ -0.05
PDLIM7-208ENST00000493815 IL1AP01583 271 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 ERVFRD-1P60508 538 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 ZNF273Q14593 569 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 KRBOX4Q5JUW0 171 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 C8orf46Q8TAG6 207 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 LGALS14Q8TCE9 139 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 NEK7Q8TDX7 302 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 DYRK2Q92630 601 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 TM2D1Q9BX74 207 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 BARHL1Q9BZE3 327 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 AUP1Q9Y679 476 aa14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 NSD1Q96L73 2696 aaPredicted RBP14.73□□□□□ -0.05
PDLIM7-208ENST00000493815 SOCS1O15524 211 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 LIPFP07098 398 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 CCL3L1P16619 93 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 GATA3P23771 443 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 P2RX3P56373 397 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 TCF23Q7RTU1 214 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 PCGF1Q9BSM1 259 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 MRI1Q9BV20 369 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 RCC2Q9P258 522 aaKnown RBP14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 FBLN5Q9UBX5 448 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 RAB22AQ9UL26 194 aa14.72□□□□□ -0.05
PDLIM7-208ENST00000493815 TRBV23-1A0A0A0MS06 115 aa14.71□□□□□ -0.05
PDLIM7-208ENST00000493815 TRAV39A0A0B4J263 110 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms