RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 DEGS1O15121 323 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 PSPNO60542 156 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 MITFO75030 526 aaPredicted RBP9.27□□□□□ -0.93
COL6A3-213ENST00000493475 OR2H2O95918 312 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 CSN2P05814 226 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 LPLP06858 475 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 IGLL1P15814 213 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 DUSP1P28562 367 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 C21orf33P30042 268 aaPredicted RBP9.27□□□□□ -0.93
COL6A3-213ENST00000493475 OR3A1P47881 315 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 SLC35B1P78383 322 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 SCN1BQ07699 218 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 MRPL28Q13084 256 aaKnown RBP9.27□□□□□ -0.93
COL6A3-213ENST00000493475 RBM39Q14498 530 aaKnown RBP9.27□□□□□ -0.93
COL6A3-213ENST00000493475 DEFB121Q5J5C9 76 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 PRAMEF5Q5TYX0 476 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 MEDAGQ5VYS4 303 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 OR52N4Q8NGI2 321 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 OR5D14Q8NGL3 314 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 BCAS4Q8TDM0 211 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 HAVCR2Q8TDQ0 301 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 WIPF2Q8TF74 440 aaPredicted RBP9.27□□□□□ -0.93
COL6A3-213ENST00000493475 CORO2AQ92828 525 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 MYDGFQ969H8 173 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 TOMM40LQ969M1 308 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 FGGYQ96C11 551 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 HRASLS5Q96KN8 279 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 CIB1Q99828 191 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 BARHL1Q9BZE3 327 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 MOB4Q9Y3A3 225 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 HSPE1-MOB4S4R3N1 261 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 ODAMA1E959 279 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 PSMB11A5LHX3 300 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 BUB1B-PAK6H3BSN5 160 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 CIB2O75838 187 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 ATP5HO75947 161 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 KDM4BO94953 1096 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 MT-ND2P03891 347 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 HCKP08631 526 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 TMEM225BP0DP42 221 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 CD34P28906 385 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 OR3A4PP47883 348 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 NPBWR2P48146 333 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 CCR9P51686 369 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 GP2P55259 537 aaKnown RBP9.26□□□□□ -0.93
COL6A3-213ENST00000493475 HLA-DRB5Q30154 266 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 TMEM95Q3KNT9 176 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 TP53I3Q53FA7 332 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 TPTE2P1Q5T6R2 138 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 HIST2H2BDQ6DRA6 164 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 SSX6Q7RTT6 188 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 TCF23Q7RTU1 214 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 FOXRED2Q8IWF2 684 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 OSR2Q8N2R0 312 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 PRSS35Q8N3Z0 413 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 COMMD1Q8N668 190 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 OR2G2Q8NGZ5 317 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 OR9G1Q8NH87 305 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 CHPT1Q8WUD6 406 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 GON7Q9BXV9 100 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 GABARAPL3Q9BY60 117 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 COMMD4Q9H0A8 199 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
COL6A3-213ENST00000493475 ADARB2-AS1A8MUL3 147 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 NUDT19A8MXV4 375 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 SLC16A6O15403 523 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 APOL3O95236 402 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 IGLV1-47P01700 117 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 NFYBP25208 207 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 LMO1P25800 156 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 KCNJ3P48549 501 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 MTNR1BP49286 362 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 CD69Q07108 199 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 AESQ08117 197 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 MADCAM1Q13477 382 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 HES1Q14469 280 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 FDX2Q6P4F2 183 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 THNSL2Q86YJ6 484 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 SERPINA12Q8IW75 414 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 ADAT3Q96EY9 351 aaPredicted RBP9.25□□□□□ -0.93
COL6A3-213ENST00000493475 CENPNQ96H22 339 aaPredicted RBP9.25□□□□□ -0.93
COL6A3-213ENST00000493475 MBOAT4Q96T53 435 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 ZNF649Q9BS31 505 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 ZCCHC4Q9H5U6 513 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 IL36RNQ9UBH0 155 aa9.25□□□□□ -0.93
COL6A3-213ENST00000493475 MEIKINA0A087WXM9 373 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 A0A087X0M5 115 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 KBTBD11-OT1A0A1B0GTJ5 212 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 A0A1B0GX30 115 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 CCDC159P0C7I6 412 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 EPHA2P29317 976 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 GLP1RP43220 463 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 GLIPR1P48060 266 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 RAB7AP51149 207 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 LDLRAD2Q5SZI1 272 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 SLC16A12Q6ZSM3 486 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 C10orf67Q8IYJ2 551 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 RDH10Q8IZV5 341 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 ACBD7Q8N6N7 88 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 OR13C9Q8NGT0 318 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms