RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 ZNF701M0R085 212 aaPredicted RBP13.08□□□□□ -0.32
HPS4-216ENST00000493455 FCN3O75636 299 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 TK1P04183 234 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 RAB6AP20340 208 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 OR3A1P47881 315 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 TMEM249Q2WGJ8 235 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 MOGAT2Q3SYC2 334 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 ZNF841Q6ZN19 808 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 C17orf107Q6ZR85 190 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 FAM185AQ8N0U4 392 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 OR56B1Q8NGI3 324 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 KCTD12Q96CX2 325 aaKnown RBP13.08□□□□□ -0.32
HPS4-216ENST00000493455 SLC25A38Q96DW6 304 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 MRI1Q9BV20 369 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 TM2D1Q9BX74 207 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 CSMD1Q96PZ7 3565 aa13.08□□□□□ -0.32
HPS4-216ENST00000493455 ITPR3Q14573 2671 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 A0A1W2PQ09 198 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 A6NHS1 94 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 MCRIP1C9JLW8 97 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 K7N7A8 449 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 HPGDSO60760 199 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 PDCD6O75340 191 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 ZNF737O75373 536 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 ZNF16P17020 682 aaPredicted RBP13.07□□□□□ -0.32
HPS4-216ENST00000493455 FUT3P21217 361 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 ZFP36P26651 326 aaKnown RBP13.07□□□□□ -0.32
HPS4-216ENST00000493455 NPY4RP50391 375 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 AESQ08117 197 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 UBE2NLQ5JXB2 153 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 SIGIRRQ6IA17 410 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 BTN2A1Q7KYR7 527 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 C6orf201Q7Z4U5 140 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 BIVMQ86UB2 503 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 IZUMO1Q8IYV9 350 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 OR8H2Q8N162 312 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 MCFD2Q8NI22 146 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 ACOT12Q8WYK0 555 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 PLEKHJ1Q9NW61 149 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 FBLN5Q9UBX5 448 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 MED13LQ71F56 2210 aa13.07□□□□□ -0.32
HPS4-216ENST00000493455 LOC105371242A0A075B767 164 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A10PA6NDY2 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A18PA6NE21 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A16PA6NEW6 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A20PA6NIJ5 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A8PA6NJQ4 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A7PA6NKC0 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A22PA8MWA6 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A12PA8MX19 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A5PA8MXJ8 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A23PA8MXZ1 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FOXH1O75593 365 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 EIF4EP06730 217 aaKnown RBP13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A15PP0C7V4 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A13PP0C7W8 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A14PP0C7W9 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAM90A24PP0C7X0 464 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 IGHV4-31P0DP07 118 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 Q6ZTK2 550 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 CMTM4Q8IZR5 234 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 OR5D13Q8NGL4 314 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 OR10R2Q8NGX6 335 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 PLPPR1Q8TBJ4 325 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 PTX4Q96A99 478 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 ARHGAP5-AS1Q96IT6 56 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 SULT4A1Q9BR01 284 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 FAAP24Q9BTP7 215 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 SHARPINQ9H0F6 387 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 ZMAT3Q9HA38 289 aaKnown RBP13.06□□□□□ -0.32
HPS4-216ENST00000493455 SPACA1Q9HBV2 294 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 ETAA1Q9NY74 926 aa13.06□□□□□ -0.32
HPS4-216ENST00000493455 MALRD1Q5VYJ5 2156 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 TRAV39A0A0B4J263 110 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 KIAA1324LA8MWY0 1029 aaPredicted RBP13.05□□□□□ -0.32
HPS4-216ENST00000493455 C22orf46C9J442 243 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 MGST3O14880 152 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 TMEM127O75204 238 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 TGFAP01135 160 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 MSMBP08118 114 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 GNB3P16520 340 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 LMO1P25800 156 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 CHATP28329 748 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 GZMKP49863 264 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 SCAND1P57086 179 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 RBM39Q14498 530 aaKnown RBP13.05□□□□□ -0.32
HPS4-216ENST00000493455 FAM189A2Q15884 450 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 KRBOX4Q5JUW0 171 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 TRAPPC6BQ86SZ2 158 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 LINC01356Q8N9X3 169 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 MSI2Q96DH6 328 aaKnown RBP13.05□□□□□ -0.32
HPS4-216ENST00000493455 RAB3CQ96E17 227 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 C18orf12Q96KH6 178 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 COX4I2Q96KJ9 171 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 PECRQ9BY49 303 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 FAM234AQ9H0X4 552 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
HPS4-216ENST00000493455 C19orf12Q9NSK7 152 aa13.05□□□□□ -0.32
HPS4-216ENST00000493455 RCC2Q9P258 522 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms