RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PSG7Q13046 419 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SRSF9Q13242 221 aaKnown RBP eCLIP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 CYLC2Q14093 348 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 CRMP1Q14194 572 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TRAM2Q15035 370 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 HIST3H3Q16695 136 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TBC1D28Q2M2D7 210 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 HFEQ30201 348 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 KRTAP21-3Q3LHN1 58 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 GLYATL3Q5SZD4 288 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 UTF1Q5T230 341 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 C10orf128Q5T292 105 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ATAD3CQ5T2N8 411 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 CYB5R2Q6BCY4 276 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 GLYATQ6IB77 296 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM53Q6P2H8 277 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 FAHD2BQ6P2I3 314 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 LEG1Q6P5S2 330 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 MBOAT2Q6ZWT7 520 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 KCTD9Q7L273 389 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 OR6V1Q8N148 313 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF786Q8N393 782 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 C11orf42Q8N5U0 333 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ZDHHC22Q8N966 263 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 OR52E2Q8NGJ4 325 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 OR6X1Q8NH79 312 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SYNPRQ8TBG9 265 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 KLF14Q8TD94 323 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 C17orf50Q8WW18 174 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 DNAJA4Q8WW22 397 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 CCL17Q92583 94 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 CMBLQ96DG6 245 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 DTNBP1Q96EV8 351 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 FAHD2AQ96GK7 314 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SLC25A44Q96H78 314 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 C7orf34Q96L11 122 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF488Q96MN9 340 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ERMAPQ96PL5 475 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 OR2V2Q96R30 315 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF607Q96SK3 696 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 FEVQ99581 238 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 GAL3ST1Q99999 423 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 NIPSNAP1Q9BPW8 284 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 RACGAP1Q9H0H5 632 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 OR52D1Q9H346 318 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TXNIPQ9H3M7 391 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF442Q9H7R0 627 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF665Q9H7R5 613 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 Q9H8V8 135 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 MARCH7Q9H992 704 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 VIPAS39Q9H9C1 493 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 NMNAT1Q9HAN9 279 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 CCNB1IP1Q9NPC3 277 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 FAIMQ9NVQ4 179 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TAS2R3Q9NYW6 316 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ACTR3BQ9P1U1 418 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ABCD2Q9UBJ2 740 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF229Q9UJW7 825 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 MGAT4BQ9UQ53 548 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SIGLEC7Q9Y286 467 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 POLR1DQ9Y2S0 133 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 FKBP7Q9Y680 259 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ENPP4Q9Y6X5 453 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 IGLV3-9A0A075B6K5 115 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 IGHV1-69-2A0A0G2JMI3 117 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 C13orf42A0A1B0GVH6 325 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 LOC390937A0A1W2PQ73 354 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 PRSS37A4D1T9 235 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 SRRM4A7MD48 611 aaKnown RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 CEACAM18A8MTB9 384 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 F5H5K5 113 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 SGCEO43556 437 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OR2T1O43869 369 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OR10H3O60404 316 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 SNX3O60493 162 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 VAMP5O95183 116 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 GADD45GO95257 159 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 MT-ATP6P00846 226 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 MSMBP08118 114 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 CD14P08571 375 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 CALCBP10092 127 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF250P15622 560 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 RPS2P15880 293 aaKnown RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 MDKP21741 143 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 MSR1P21757 451 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 GIFP27352 417 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 APLNRP35414 380 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 GGT2P36268 569 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 SH3BGRP55822 239 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 UCP2P55851 309 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 ACTG1P63261 375 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 TNFAIP6P98066 277 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF92Q03936 586 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 MFGE8Q08431 387 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 MAB21L1Q13394 359 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 KIAA0141Q14154 515 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OPCMLQ14982 345 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 SLC36A2Q495M3 483 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 ZBED5Q49AG3 693 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms