RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 IGHMP01871 453 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 ATP6V1E1P36543 226 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 RBMXP38159 391 aaKnown RBP11.02□□□□□ -0.65
HDAC3-213ENST00000492506 C4orf46Q504U0 113 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 AWAT2Q6E213 333 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 C11orf88Q6PI97 169 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 HIST2H3AQ71DI3 136 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 SLC36A1Q7Z2H8 476 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 COMMD1Q8N668 190 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 SDR9C7Q8NEX9 313 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 OR6X1Q8NH79 312 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 ST7LQ8TDW4 575 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 PRRC1Q96M27 445 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 NEU1Q99519 415 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 WFDC6Q9BQY6 131 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 GGACTQ9BVM4 153 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 FNDC11Q9BVV2 318 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 C1orf198Q9H425 327 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 MAN2C1Q9NTJ4 1040 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 UQCC1Q9NVA1 299 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 TNFSF18Q9UNG2 199 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF281Q9Y2X9 895 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 INSIG2Q9Y5U4 225 aa11.02□□□□□ -0.65
HDAC3-213ENST00000492506 A0A0B4J2E0 115 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 A0A1B0GX12 115 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 MFNGO00587 321 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 GOSR2O14653 212 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 FFAR1O14842 300 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 DHHO43323 396 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 SPRY3O43610 288 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 ADH4P08319 380 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 MMP7P09237 267 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-213ENST00000492506 CALCBP10092 127 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 MUC1P15941 1255 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-213ENST00000492506 TNFRSF1BP20333 461 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 OMGP23515 440 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 MPV17P39210 176 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 SLC6A9P48067 706 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 TBC1D28Q2M2D7 210 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 HIST2H2BDQ6DRA6 164 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 C9orf139Q6ZV77 190 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 CEACAM19Q7Z692 300 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF101Q8IZC7 436 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 CPEB3Q8NE35 698 aaKnown RBP11.01□□□□□ -0.65
HDAC3-213ENST00000492506 OR4K5Q8NGD3 323 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 OR1J1Q8NGS3 322 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 BBS10Q8TAM1 723 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF671Q8TAW3 534 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 ABHD4Q8TB40 342 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 WFDC12Q8WWY7 111 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 HIST1H2BAQ96A08 127 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 MARS2Q96GW9 593 aaKnown RBP11.01□□□□□ -0.65
HDAC3-213ENST00000492506 METTL9Q9H1A3 318 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 TREM1Q9NP99 234 aa11.01□□□□□ -0.65
HDAC3-213ENST00000492506 KMT2CQ8NEZ4 4911 aaKnown RBP11.01□□□□□ -0.65
HDAC3-213ENST00000492506 ELOA3CA0A087WX78 387 aaPredicted RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 C11orf98E9PRG8 122 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 PTBP3O95758 552 aaKnown RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 SPARCP09486 303 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 PGA4P0DJD7 388 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 PGA3P0DJD8 388 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 IGHV4-38-2P0DP08 117 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 HIST1H1BP16401 226 aaKnown RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 ADCYAP1P18509 176 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 MAS1LP35410 378 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 WNT5AP41221 380 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 RGS8P57771 180 aaPredicted RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 PAX8Q06710 450 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 POU4F2Q12837 409 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 OR1Q1Q15612 314 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 NRN1LQ496H8 165 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 SFRP4Q6FHJ7 346 aaPredicted RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 LINC00114Q6XXX2 140 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 SLC35D2Q76EJ3 337 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 DPPA2Q7Z7J5 298 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 OR1S2Q8NGQ3 325 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 OR1J2Q8NGS2 313 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 S100A16Q96FQ6 103 aaKnown RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 C14orf144Q96I85 54 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 NOL4LQ96MY1 436 aaPredicted RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 CITED1Q99966 193 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 NRIP2Q9BQI9 281 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF649Q9BS31 505 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF426Q9BUY5 554 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 ALG8Q9BVK2 526 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF471Q9BX82 626 aaPredicted RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 PATZ1Q9HBE1 687 aaKnown RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 TMEM27Q9HBJ8 222 aa11□□□□□ -0.65
HDAC3-213ENST00000492506 RCC2Q9P258 522 aaKnown RBP11□□□□□ -0.65
HDAC3-213ENST00000492506 OR2AT4A6NND4 320 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 F5H0A9 414 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 F8VVB4 439 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 F8VWA3 439 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 J3QRE1 110 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 TGOLN2O43493 480 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 FARS2O95363 451 aaKnown RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 IGF2P01344 180 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 CD55P08174 381 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 HOXB5P09067 269 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 QDPRP09417 244 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms