RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	BANF2	Q9H503	90 aa		15.2	■□□□□ 0.02
C4A-256	ENST00000490663	TCF7L1	Q9HCS4	588 aa		15.2	■□□□□ 0.02
C4A-256	ENST00000490663	ST3GAL6	Q9Y274	331 aa		15.2	■□□□□ 0.02
C4A-256	ENST00000490663	TRAV24	A0A0B4J272	114 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	MGST3	O14880	152 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	GEMIN2	O14893	280 aa	Known RBP	15.19	■□□□□ 0.02
C4A-256	ENST00000490663	CSTB	P04080	98 aa	Known RBP	15.19	■□□□□ 0.02
C4A-256	ENST00000490663	UCHL1	P09936	223 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	PAX6	P26367	422 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	PSMB9	P28065	219 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	RBM11	P57052	281 aa	Known RBP	15.19	■□□□□ 0.02
C4A-256	ENST00000490663	BLMH	Q13867	455 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	TUSC1	Q2TAM9	212 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	PAN3	Q58A45	887 aa	Known RBP	15.19	■□□□□ 0.02
C4A-256	ENST00000490663	BRICD5	Q6PL45	260 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	C9orf139	Q6ZV77	190 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	TRAPPC6B	Q86SZ2	158 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	SVOP	Q8N4V2	548 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	C11orf42	Q8N5U0	333 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	OR51T1	Q8NGJ9	327 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	OR5D13	Q8NGL4	314 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	TAF15	Q92804	592 aa	Known RBP eCLIP	15.19	■□□□□ 0.02
C4A-256	ENST00000490663	GFI1	Q99684	422 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	C19orf24	Q9BVV8	132 aa		15.19	■□□□□ 0.02
C4A-256	ENST00000490663	BMX	P51813	675 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	P2RX3	P56373	397 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	BAMBI	Q13145	260 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	OR10K2	Q6IF99	312 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	ZNF773	Q6PK81	442 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	BAIAP2L2	Q6UXY1	529 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	NKAIN3	Q8N8D7	197 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	TMEM104	Q8NE00	496 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	PLPPR1	Q8TBJ4	325 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	THRSP	Q92748	146 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	FAM46B	Q96A09	425 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	METTL8	Q9H825	291 aa	Known RBP	15.18	■□□□□ 0.02
C4A-256	ENST00000490663	SEBOX	Q9HB31	216 aa	Predicted RBP	15.18	■□□□□ 0.02
C4A-256	ENST00000490663	RHOF	Q9HBH0	211 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	IL36G	Q9NZH8	169 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	TENM1	Q9UKZ4	2725 aa		15.18	■□□□□ 0.02
C4A-256	ENST00000490663	TRAV39	A0A0B4J263	110 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	FAM172BP	A6NC97	362 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	NPFF	O15130	113 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	MMP23A	O75900	390 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	OR7C1	O76099	320 aa	Predicted RBP	15.17	■□□□□ 0.02
C4A-256	ENST00000490663	ZNF728	P0DKX0	622 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	SRM	P19623	302 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	PRTN3	P24158	256 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	LMO1	P25800	156 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	CALR	P27797	417 aa	Known RBP	15.17	■□□□□ 0.02
C4A-256	ENST00000490663	GABRA5	P31644	462 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	IL13RA2	Q14627	380 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	TAF9	Q16594	264 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	UBE2U	Q5VVX9	321 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	RBMS3	Q6XE24	437 aa	Known RBP	15.17	■□□□□ 0.02
C4A-256	ENST00000490663		Q8NFD4	153 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	C17orf50	Q8WW18	174 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	ZDHHC16	Q969W1	377 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	ZNF714	Q96N38	554 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	AK6	Q9Y3D8	172 aa	Known RBP	15.17	■□□□□ 0.02
C4A-256	ENST00000490663	LRRC42	Q9Y546	428 aa		15.17	■□□□□ 0.02
C4A-256	ENST00000490663	HOXA3	O43365	443 aa	Predicted RBP	15.16	■□□□□ 0.02
C4A-256	ENST00000490663	CRTAP	O75718	401 aa	Predicted RBP	15.16	■□□□□ 0.02
C4A-256	ENST00000490663	SAA4	P35542	130 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	UBA52	P62987	128 aa	Known RBP	15.16	■□□□□ 0.02
C4A-256	ENST00000490663	NEDD8	Q15843	81 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	KRBOX4	Q5JUW0	171 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	ATAD3C	Q5T2N8	411 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	PRAMEF5	Q5TYX0	476 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	USP43	Q70EL4	1123 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	SUMF2	Q8NBJ7	301 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	PPP1R35	Q8TAP8	253 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	TMEM158	Q8WZ71	300 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	DMRTB1	Q96MA1	342 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	YTHDF1	Q9BYJ9	559 aa	Known RBP	15.16	■□□□□ 0.02
C4A-256	ENST00000490663	NDUFB11	Q9NX14	153 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663	KIF25	Q9UIL4	384 aa		15.16	■□□□□ 0.02
C4A-256	ENST00000490663		A0A0A6YYJ9	748 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	hADV38S2	A0JD32	116 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	SHISA3	A0PJX4	238 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	MEIOC	A2RUB1	952 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	SMIM30	A4D0T7	59 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	C17orf98	A8MV24	154 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	MGMT	P16455	207 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	GDNF	P39905	211 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	P2RY14	Q15391	338 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	TRAM1	Q15629	374 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	C1orf122	Q6ZSJ8	110 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	CHST4	Q8NCG5	386 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	TBC1D15	Q8TC07	691 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	PHYHIP	Q92561	330 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	SELENOI	Q9C0D9	397 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663	LINC00312	Q9Y6C7	94 aa		15.15	■□□□□ 0.02
C4A-256	ENST00000490663		A0A1W2PPH5	198 aa		15.14	■□□□□ 0.01
C4A-256	ENST00000490663	ODAM	A1E959	279 aa		15.14	■□□□□ 0.01
C4A-256	ENST00000490663	MRPS14	O60783	128 aa	Known RBP	15.14	■□□□□ 0.01
C4A-256	ENST00000490663	MPIG6B	O95866	241 aa		15.14	■□□□□ 0.01
C4A-256	ENST00000490663	MELTF	P08582	738 aa		15.14	■□□□□ 0.01
C4A-256	ENST00000490663	GTF2F2	P13984	249 aa		15.14	■□□□□ 0.01
C4A-256	ENST00000490663	OMG	P23515	440 aa		15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms