RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 BANF2Q9H503 90 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 RNF167Q9H6Y7 350 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 KPTNQ9Y664 436 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 A0A1W2PQ09 198 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 HSPB6O14558 160 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 TOX4O94842 621 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 VSIG8P0DPA2 414 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 HTR2CP28335 458 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 EDDM3BP56851 147 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 ERVFRD-1P60508 538 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 UNC119Q13432 240 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 TAF9Q16594 264 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 METTL11BQ5VVY1 283 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 OR10K2Q6IF99 312 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 GDPD3Q7L5L3 318 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 KIR3DL3Q8N743 410 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 OR5D13Q8NGL4 314 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 FAM46BQ96A09 425 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 YIPF6Q96EC8 236 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 COQ2Q96H96 371 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 IFT22Q9H7X7 185 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 SOX21Q9Y651 276 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 COL6A5A8TX70 2615 aa11.81□□□□□ -0.52
SRGAP3-208ENST00000490348 TRAV40A0A0B4J280 105 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 SLC17A2O00624 439 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 MGST3O14880 152 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 CRTAPO75718 401 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 CSN2P05814 226 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 MGMTP16455 207 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 CCL3L1P16619 93 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 DLX6P56179 175 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 RIPPLY3P57055 190 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 AESQ08117 197 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 GPR176Q14439 515 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 ATXN7L3Q14CW9 347 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 P2RY14Q15391 338 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 VMO1Q7Z5L0 202 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 BPIFB2Q8N4F0 458 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 OR6M1Q8NGM8 313 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 TNFRSF14Q92956 283 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 Q96M66 194 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 CHCHD6Q9BRQ6 235 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 CENPOQ9BU64 300 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 SIRT7Q9NRC8 400 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 GHRLQ9UBU3 117 aa11.8□□□□□ -0.52
SRGAP3-208ENST00000490348 CENPVL3A0A0U1RRI6 287 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 SMIM30A4D0T7 59 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 OR7C1O76099 320 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 EPHA1P21709 976 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 ERP29P30040 261 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 GLIPR1P48060 266 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 P2RX3P56373 397 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 CLDN12P56749 244 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 TUSC1Q2TAM9 212 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 SIGIRRQ6IA17 410 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 BRICD5Q6PL45 260 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 BCL6BQ8N143 479 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 SUMF2Q8NBJ7 301 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 C22orf15Q8WYQ4 148 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 MRPS24Q96EL2 167 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 SELENOIQ9C0D9 397 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 ZNF69Q9UC07 566 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 NUP50Q9UKX7 468 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 SSR3Q9UNL2 185 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 V9GY05 133 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 KIAA2026Q5HYC2 2103 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 LOC100506127A0A0U1RQW1 187 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 TMEM14DPA8MWL7 114 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 M0R1W7 72 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 UBBP0CG47 229 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 MYL9P24844 172 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 CFPP27918 469 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 TGFBR1P36897 503 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 PLA2G7Q13093 441 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 MPV17LQ2QL34 196 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 PAN3Q58A45 887 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 HES5Q5TA89 166 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 BRD3OSQ6XYD6 125 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 C1orf122Q6ZSJ8 110 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 LINC00596Q86U02 117 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 PDZD9Q8IXQ8 264 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 PLPPR1Q8TBJ4 325 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 LHX4Q969G2 390 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 DPCDQ9BVM2 203 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 UNKLQ9H9P5 680 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 PLGRKTQ9HBL7 147 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 VCX3AQ9NNX9 186 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 PCDHB16Q9NRJ7 776 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 ING3Q9NXR8 418 aa11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 RCC2Q9P258 522 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-208ENST00000490348 IFITM5A6NNB3 132 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 RNASEK-C17orf49H0YIS7 233 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 BPNT1O95861 308 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 MPIG6BO95866 241 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 RAB3BP20337 219 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 MEF2CQ06413 473 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 KLRD1Q13241 179 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 RAB11BQ15907 218 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 RUSC1-AS1Q66K80 236 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 HCP5Q6MZN7 132 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms