RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 OR8U8P0C7N1 319 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 METTL15P1P0C7V9 234 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GIMD1P0DJR0 217 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 C1GALT1C1LP0DN25 315 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ABOP16442 354 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CXCL2P19875 107 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 MAGEA12P43365 314 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 DAP3P51398 398 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 MTPNP58546 118 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 LINC00205P59089 165 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 DNAJB13P59910 316 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 REEP5Q00765 189 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 EMX2Q04743 252 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 HTR4Q13639 388 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ACTBL2Q562R1 376 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PYY3Q5JQD4 70 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 AKR1C8PQ5T2L2 129 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 HIST2H3PS2Q5TEC6 136 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF626Q68DY1 528 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OR2T5Q6IEZ7 315 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 C19orf48Q6RUI8 117 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TRPT1Q86TN4 253 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SPICQ8N5J4 248 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CCDC54Q8NEL0 328 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 NOXO1Q8NFA2 376 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OR10G3Q8NGC4 313 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OR6N2Q8NGY6 317 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OR2T29Q8NH02 315 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OR56B4Q8NH76 319 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 BAALCQ8WXS3 180 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OTUB2Q96DC9 234 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TECTBQ96PL2 329 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OR2M4Q96R27 311 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PITX2Q99697 317 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RASL11BQ9BPW5 248 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 KLHDC3Q9BQ90 382 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TMEM208Q9BTX3 173 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 DDA1Q9BW61 102 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 POLR2J2Q9GZM3 115 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PTGES2Q9H7Z7 377 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 BEX1Q9HBH7 125 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 LHX9Q9NQ69 397 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 MRPL22Q9NWU5 206 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CLCF1Q9UBD9 225 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CTSZQ9UBR2 303 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 C19orf25Q9UFG5 118 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OR12D3Q9UGF7 316 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CARHSP1Q9Y2V2 147 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PRG3Q9Y2Y8 225 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 HES2Q9Y543 173 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 COL1A2P08123 1366 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 IGHV3OR16-10A0A075B7F0 116 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 IGHV1OR21-1A0A087WYE8 117 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 KIR2DS1A0A191URI9 304 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SMCO3A2RU48 225 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SEC14L6B5MCN3 397 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PPP1R2P9O14990 202 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 EEF1E1O43324 174 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GGCTO75223 188 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 NGFP01138 241 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SERPINA5P05154 406 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GNB3P16520 340 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CSNK1DP48730 415 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 POLR2JP52435 117 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 AKR1C2P52895 323 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RAG2P55895 527 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 NDUFA6P56556 154 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CDC42P60953 191 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RPS15AP62244 130 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RAP1AP62834 184 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 EIF5AP63241 154 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CCL7P80098 99 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 DHODHQ02127 395 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 AKR1C1Q04828 323 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 KIR2DS1Q14954 304 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 OR4D1Q15615 310 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 C14orf28Q4W4Y0 310 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RNF165Q6ZSG1 346 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SSX7Q7RTT5 188 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 STK40Q8N2I9 435 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TOMM5Q8N4H5 51 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PSMG2Q969U7 264 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 HIST1H2BAQ96A08 127 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CPNE2Q96FN4 548 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ATOH8Q96SQ7 321 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 S100A13Q99584 98 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF426Q9BUY5 554 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SLC25A39Q9BZJ4 359 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GABARAPL1Q9H0R8 117 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 B3GAT2Q9NPZ5 323 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RPS6KB2Q9UBS0 482 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 MOKQ9UQ07 419 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SLC35A3Q9Y2D2 325 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TSSC4Q9Y5U2 329 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 UBIAD1Q9Y5Z9 338 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 NINQ8N4C6 2090 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 NUP210Q8TEM1 1887 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 LOC285095A0A1B0GVY8 99 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OR5B21A6NL26 309 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms