RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 EURLQ9NYK6 297 aa1.09□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF492Q9P255 531 aa1.09□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF391Q9UJN7 358 aa1.09□□□□□ -2.23
CPSF3-205ENST00000489629 SLC22A7Q9Y694 548 aa1.09□□□□□ -2.23
CPSF3-205ENST00000489629 PIK3R4Q99570 1358 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 CACNA1SQ13698 1873 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 IGKV2-24A0A0C4DH68 120 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 A0A1W2PNN7 141 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 MYBPHLA2RUH7 354 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 PCNX2A6NKB5 2137 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 C9JQL5 133 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 C8orf87E5RJ46 101 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 J3QLI3 93 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 ADAP1O75689 374 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 TNFAIP8O95379 198 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 EPPINO95925 133 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 NRASP01111 189 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 HRASP01112 189 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 KRASP01116 189 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 IGHG2P01859 326 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 TRGV3P03979 118 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 CDK1P06493 297 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 ZNF35P13682 527 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 HRES1P13985 223 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 SLC6A1P30531 599 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 GTF2H1P32780 548 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 XKP51811 444 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 SLC18A1P54219 525 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 PRDX1Q06830 199 aaKnown RBP1.08□□□□□ -2.24
CPSF3-205ENST00000489629 BAXQ07812 192 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 BAMBIQ13145 260 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 RAB31Q13636 194 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 TRIP13Q15645 432 aaPredicted RBP1.08□□□□□ -2.24
CPSF3-205ENST00000489629 GLYATQ6IB77 296 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 ERICH5Q6P6B1 374 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 XKRXQ6PP77 449 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 CLEC18BQ6UXF7 455 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 SSX6Q7RTT6 188 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 FAM19A3Q7Z5A8 133 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 LINC00596Q86U02 117 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 OTUD6BQ8N6M0 293 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 ZIC4Q8N9L1 334 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 OR2M3Q8NG83 312 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 OR4C13Q8NGP0 309 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 OR5H2Q8NGV7 314 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 OR8S1Q8NH09 359 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 ANGPTL6Q8NI99 470 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 PDCD6IPQ8WUM4 868 aaKnown RBP1.08□□□□□ -2.24
CPSF3-205ENST00000489629 RORBQ92753 470 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 GTF2H4Q92759 462 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 MAL2Q969L2 176 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 YIPF5Q969M3 257 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 CCDC124Q96CT7 223 aaKnown RBP1.08□□□□□ -2.24
CPSF3-205ENST00000489629 TVP23CQ96ET8 276 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 PGLYRP3Q96LB9 341 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 PPP1R36Q96LQ0 422 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 CYTH2Q99418 400 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 TSSK6Q9BXA6 273 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 SRRQ9GZT4 340 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 OR52A5Q9H2C5 316 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 VSIRQ9H7M9 311 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 TRIM45Q9H8W5 580 aaPredicted RBP1.08□□□□□ -2.24
CPSF3-205ENST00000489629 PARP11Q9NR21 331 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 TAS2R1Q9NYW7 299 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 DNAJC27Q9NZQ0 273 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 ZNF230Q9UIE0 474 aaPredicted RBP1.08□□□□□ -2.24
CPSF3-205ENST00000489629 R4GN34 69 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 URGCP-MRPS24S4R325 110 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 ABCB11O95342 1321 aa1.08□□□□□ -2.24
CPSF3-205ENST00000489629 FBN3Q75N90 2809 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 BAZ1BQ9UIG0 1483 aaKnown RBP1.07□□□□□ -2.24
CPSF3-205ENST00000489629 IGKV1OR2-108A0A075B7D4 117 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 TRPC5OSA6NMA1 111 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 IGLL5B9A064 214 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 C4orf51C9J302 202 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 K7EPK0 472 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 SULT1C2O00338 296 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 TCAPO15273 167 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 MPZL2O60487 215 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 PDCD6O75340 191 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 KLHL2O95198 593 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 CXorf1O96002 111 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 CA2P00918 260 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 IGLV6-57P01721 117 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 CECR9P0C854 216 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 IMPA1P29218 277 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 HTR2BP41595 481 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 TTPAP49638 278 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 PSMD7P51665 324 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 TSPAN5P62079 268 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 DYNLL1P63167 89 aaKnown RBP1.07□□□□□ -2.24
CPSF3-205ENST00000489629 BIKQ13323 160 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 ANGPT1Q15389 498 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 CLEC12AQ5QGZ9 265 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 TIMM23BQ5SRD1 257 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 ELP2Q6IA86 826 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 WDR59Q6PJI9 974 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 UGT2A3Q6UWM9 527 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 TMEM144Q7Z5S9 345 aa1.07□□□□□ -2.24
CPSF3-205ENST00000489629 CYP4Z1Q86W10 505 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms