RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 BEX1Q9HBH7 125 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 TMEM138Q9NPI0 162 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 PCDHGB5Q9Y5G0 923 aa17.17■□□□□ 0.34
LIME1-207ENST00000489212 MAGEA13PA6NCF6 341 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 DEGS1O15121 323 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 LGALS4P56470 323 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 WNT4P56705 351 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 PPP3R1P63098 170 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 Q499Y3 187 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 DDI2Q5TDH0 399 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 ZNF626Q68DY1 528 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 NANOGP1Q8N7R0 232 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 CHST4Q8NCG5 386 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 Q8NFD4 153 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 OR11H6Q8NGC7 330 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 OR13D1Q8NGV5 346 aa17.16■□□□□ 0.34
LIME1-207ENST00000489212 NR1H4Q96RI1 486 aaPredicted RBP17.16■□□□□ 0.34
LIME1-207ENST00000489212 TRAV8-7A0A075B6U6 113 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 TRBV5-7A0A0A0MS05 114 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 A0A1B0GUS0 222 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 CLPSL1A2RUU4 121 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 H0YJX3 145 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 MYL12BO14950 172 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 CDRT1O95170 752 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 ARG1P05089 322 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 BDKRB2P30411 391 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 PTGFRP43088 359 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 TAS2R43P59537 309 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 SRSF4Q08170 494 aaKnown RBP17.15■□□□□ 0.34
LIME1-207ENST00000489212 LRRC75BQ2VPJ9 315 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 C6orf141Q5SZD1 244 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 OLFML2AQ68BL7 652 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 BAIAP2L2Q6UXY1 529 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 Q6ZSV7 163 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 TRAPPC6BQ86SZ2 158 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 OR51T1Q8NGJ9 327 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 SGMS2Q8NHU3 365 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 LINC01006Q8NI28 216 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 SGCDQ92629 289 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 OR14A2Q96R54 314 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 SLITRK2Q9H156 845 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 ING3Q9NXR8 418 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 UBE2J1Q9Y385 318 aaPredicted RBP17.15■□□□□ 0.34
LIME1-207ENST00000489212 SESN1Q9Y6P5 492 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 CMYA5Q8N3K9 4069 aa17.15■□□□□ 0.34
LIME1-207ENST00000489212 TRAV24A0A0B4J272 114 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 A0A1W2PPK0 400 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 GPX5O75715 221 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 CLPXO76031 633 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 CSN2P05814 226 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 CDK1P06493 297 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 CELP19835 753 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 ZNF93P35789 620 aaPredicted RBP17.14■□□□□ 0.33
LIME1-207ENST00000489212 RIPK1Q13546 671 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 ATXN7L3Q14CW9 347 aaPredicted RBP17.14■□□□□ 0.33
LIME1-207ENST00000489212 RSU1Q15404 277 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 LY6EQ16553 131 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 PIGYQ3MUY2 71 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 DHRS7BQ6IAN0 325 aaPredicted RBP17.14■□□□□ 0.33
LIME1-207ENST00000489212 PIFOQ8TCI5 191 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 WFDC12Q8WWY7 111 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 CORO2AQ92828 525 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 PAK1IP1Q9NWT1 392 aaPredicted RBP17.14■□□□□ 0.33
LIME1-207ENST00000489212 ZNF581Q9P0T4 197 aa17.14■□□□□ 0.33
LIME1-207ENST00000489212 IGHV2-26A0A0B4J1V2 119 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 ODAMA1E959 279 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 PTGES3LE9PB15 166 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 HSPB6O14558 160 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 HTR3BO95264 441 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 FSTP19883 344 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 IL13RA2Q14627 380 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 AANATQ16613 207 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 KRBOX4Q5JUW0 171 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 PRAMEF5Q5TYX0 476 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 ZNF184Q99676 751 aaPredicted RBP17.13■□□□□ 0.33
LIME1-207ENST00000489212 PPIL3Q9H2H8 161 aaKnown RBP17.13■□□□□ 0.33
LIME1-207ENST00000489212 TMEM133Q9H2Q1 129 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 ING4Q9UNL4 249 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 ERGIC3Q9Y282 383 aa17.13■□□□□ 0.33
LIME1-207ENST00000489212 TBL2Q9Y4P3 447 aaKnown RBP17.13■□□□□ 0.33
LIME1-207ENST00000489212 TRGV10A0A0A0MS01 117 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 FUOMA2VDF0 154 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 MEGF11A6BM72 1044 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 PIN1P1O15428 100 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 CD1AP06126 327 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 GDNFP39905 211 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 KRTAP10-3P60369 221 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 DYNC1I2Q13409 638 aaKnown RBP17.12■□□□□ 0.33
LIME1-207ENST00000489212 PLA1AQ53H76 456 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 RNLSQ5VYX0 342 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 DERL3Q96Q80 235 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 METTL9Q9H1A3 318 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 IL36GQ9NZH8 169 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 RNF114Q9Y508 228 aa17.12■□□□□ 0.33
LIME1-207ENST00000489212 TSPAN9O75954 239 aa17.11■□□□□ 0.33
LIME1-207ENST00000489212 CDK2P24941 298 aa17.11■□□□□ 0.33
LIME1-207ENST00000489212 TGFBR2P37173 567 aa17.11■□□□□ 0.33
LIME1-207ENST00000489212 PAN3Q58A45 887 aaKnown RBP17.11■□□□□ 0.33
LIME1-207ENST00000489212 HEPN1Q6WQI6 88 aa17.11■□□□□ 0.33
LIME1-207ENST00000489212 OR5M11Q96RB7 305 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms