RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 POLR2GP62487 172 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLIC4-202ENST00000488683 DCAF12Q5T6F0 453 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 FBXW12Q6X9E4 464 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 C20orf204Q6ZNR8 217 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.66
CLIC4-202ENST00000488683 GPR37O15354 613 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 CYTIPO60759 359 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 MRPL33O75394 65 aaKnown RBP10.9□□□□□ -0.66
CLIC4-202ENST00000488683 SPP1P10451 314 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 IL32P24001 234 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 CAV2P51636 162 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 CEBPGP53567 150 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 HNF4GQ14541 408 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 SMCO1Q147U7 214 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 RIPPLY2Q5TAB7 128 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 IL34Q6ZMJ4 242 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 TMEM217Q8N7C4 229 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 IP6K3Q96PC2 410 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 BCO1Q9HAY6 547 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 CDRT15L2A8MXV6 281 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 CRYBA1P05813 215 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 FUT6P51993 359 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 RBM11P57052 281 aaKnown RBP10.89□□□□□ -0.67
CLIC4-202ENST00000488683 CXorf66Q5JRM2 361 aaPredicted RBP10.89□□□□□ -0.67
CLIC4-202ENST00000488683 TMEM182Q6ZP80 229 aaPredicted RBP10.89□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF100Q8IYN0 542 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 HPSE2Q8WWQ2 592 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 RDH5Q92781 318 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 MSI2Q96DH6 328 aaKnown RBP10.89□□□□□ -0.67
CLIC4-202ENST00000488683 CLCC1Q96S66 551 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 STARD10Q9Y365 291 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 FBXO7Q9Y3I1 522 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 B4E171 279 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 H3BP45 60 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 H7C2Y5 167 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 TAAR5O14804 337 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 CST4P01036 141 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 PPP1CCP36873 323 aaKnown RBP10.89□□□□□ -0.67
CLIC4-202ENST00000488683 TSPAN7P41732 249 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 SULT1A2P50226 295 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 MALLQ13021 153 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 PRDX4Q13162 271 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 BTNL8Q6UX41 500 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF818PQ6ZRF7 136 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 EXTL1Q92935 676 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 SAT2Q96F10 170 aaPredicted RBP10.89□□□□□ -0.67
CLIC4-202ENST00000488683 GALNT14Q96FL9 552 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 USB1Q9BQ65 265 aaKnown RBP10.89□□□□□ -0.67
CLIC4-202ENST00000488683 ARRDC1-AS1Q9H2J1 176 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 MTCH1Q9NZJ7 389 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 SLC7A11Q9UPY5 501 aa10.89□□□□□ -0.67
CLIC4-202ENST00000488683 MAP1BP46821 2468 aaKnown RBP10.89□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF816-ZNF321PA0A0X1KG74 233 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 PDCD6O75340 191 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 WISP2O76076 250 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 CST7O76096 145 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 PRH1P02810 166 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 SNRNP70P08621 437 aaKnown RBP10.88□□□□□ -0.67
CLIC4-202ENST00000488683 HERPUD1Q15011 391 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 HIKESHIQ53FT3 197 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 C6orf15Q6UXA7 325 aaPredicted RBP10.88□□□□□ -0.67
CLIC4-202ENST00000488683 RAB11FIP2Q7L804 512 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 OR10Z1Q8NGY1 313 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 CPNE4Q96A23 557 aaPredicted RBP10.88□□□□□ -0.67
CLIC4-202ENST00000488683 C18orf12Q96KH6 178 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 GUCD1Q96NT3 240 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 RARRES2Q99969 163 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 IER2Q9BTL4 223 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 EIF5A2Q9GZV4 153 aaKnown RBP10.88□□□□□ -0.67
CLIC4-202ENST00000488683 IL36GQ9NZH8 169 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 KCNIP3Q9Y2W7 256 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 KALRNO60229 2985 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 C9orf172C9J069 976 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 SSSCA1O60232 199 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 NEURL1O76050 574 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 PPYP01298 95 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 IGHEP01854 428 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 TFF1P04155 84 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 SERPINA7P05543 415 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 FBP1P09467 338 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 JMJD7P0C870 316 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 OR13C7P0DN81 318 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 EPHA1P21709 976 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 GNRHRP30968 328 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 CCL20P78556 96 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 SWI5Q1ZZU3 235 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 FAM53AQ6NSI3 398 aaPredicted RBP10.88□□□□□ -0.67
CLIC4-202ENST00000488683 MOB3AQ96BX8 217 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 KIRREL1Q96J84 757 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 C1QTNF5Q9BXJ0 243 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 SEC11CQ9BY50 192 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 LIPGQ9Y5X9 500 aa10.88□□□□□ -0.67
CLIC4-202ENST00000488683 C19orf67A6NJJ6 358 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF732B4DXR9 585 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 RHBDL1O75783 438 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 H2AFB1P0C5Y9 115 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 PCBD1P61457 104 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 HERV-K104P61576 105 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 RUNX1Q01196 453 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 SSPNQ14714 243 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms