RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 KLF3P57682 345 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 UBE2KP61086 200 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 DYNC1I2Q13409 638 aaKnown RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ENDOGQ14249 297 aaKnown RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 TNXAQ16473 311 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF404Q494X3 552 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 PYDC2Q56P42 97 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 LDLRAD2Q5SZI1 272 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF660Q6AZW8 331 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 AMMECR1LQ6DCA0 310 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 EPGNQ6UW88 154 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 PLEKHG7Q6ZR37 379 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ADM2Q7Z4H4 148 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 LINC00596Q86U02 117 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 CRLF3Q8IUI8 442 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR6K3Q8NGY3 331 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 CASTOR1Q8WTX7 329 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 C2orf15Q8WU43 125 aaKnown RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ITLN2Q8WWU7 325 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 NELFBQ8WX92 580 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ITFG2Q969R8 447 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 CPB2Q96IY4 423 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ADTRPQ96IZ2 230 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 FAM210AQ96ND0 272 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 SERPINB11Q96P15 392 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 BEX2Q9BXY8 128 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 UPF3BQ9BZI7 483 aaKnown RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 DRC3Q9H069 523 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ACOT13Q9NPJ3 140 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF230Q9UIE0 474 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 NXT1Q9UKK6 140 aaKnown RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 FADS3Q9Y5Q0 445 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 URGCP-MRPS24S4R325 110 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 SCN4AP35499 1836 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 NID2Q14112 1375 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 A0A0A6YYH2 397 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 TVP23AA6NH52 213 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 A6NJ64 397 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 C4orf51C9J302 202 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 F8VP50 259 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 C15orf65H3BRN8 121 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 hCG_2039718K7EN88 272 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ITGB1BP1O14713 200 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ENSAO43768 121 aaKnown RBP1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 FSTL3O95633 263 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 IGHG2P01859 326 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 CECR9P0C854 216 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 LIPCP11150 499 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 TAC1P20366 129 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 PSMB9P28065 219 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 TTPAP49638 278 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF83P51522 516 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR2B6P58173 313 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 TSPAN5P62079 268 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 MRPS15P82914 257 aaKnown RBP1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR4D1Q15615 310 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF141Q15928 474 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 FAHD1Q6P587 224 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 TPGS1Q6ZTW0 290 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 SSX7Q7RTT5 188 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 AMN1Q8IY45 258 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 RPRMLQ8N4K4 120 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ATPAF2Q8N5M1 289 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF738Q8NE65 137 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF555Q8NEP9 628 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 BPIFB6Q8NFQ5 453 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR8G5Q8NG78 346 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ACTL9Q8TC94 416 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 TWIST2Q8WVJ9 160 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 IFT81Q8WYA0 676 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF514Q96K75 400 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF251Q9BRH9 671 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 C7orf50Q9BRJ6 194 aaKnown RBP1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 VSIRQ9H7M9 311 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 EURLQ9NYK6 297 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 CLEC2DQ9UHP7 191 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 NAGKQ9UJ70 344 aa1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 C14orf166Q9Y224 244 aaKnown RBP1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 PUS1Q9Y606 427 aaKnown RBP eCLIP1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 USP42Q9H9J4 1324 aaKnown RBP1.88□□□□□ -2.11
HMGB1P36-201ENST00000487709 TICRRQ7Z2Z1 1910 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 LOXHD1Q8IVV2 1947 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 IGHV3-21A0A0B4J1V1 117 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 TMEM213A2RRL7 107 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 UBDO15205 165 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 ENTPD6O75354 484 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 PSIP1O75475 530 aaKnown RBP1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 TNFAIP8O95379 198 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 IGHV3-53P01767 116 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 KDELR2P33947 212 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 RAB25P57735 213 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 UBE2G2P60604 165 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 MEF2BQ02080 365 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 C2orf80Q0P641 193 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 SLAMF1Q13291 335 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 GOLGA7BQ2TAP0 167 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 CLLU1OSQ5K130 101 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 PRR14LQ5THK1 2151 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 Q6ZQT7 251 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms