RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 Q499Y3 187 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 BEX5Q5H9J7 111 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 LAIR2Q6ISS4 152 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 TMEM53Q6P2H8 277 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 C16orf87Q6PH81 154 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 SCGB1C1Q8TD33 95 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 ELOVL6Q9H5J4 265 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 XKR8Q9H6D3 395 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 AP3M1Q9Y2T2 418 aa0.1□□□□□ -2.39
RBM39-234ENST00000487604 IGKV2-40A0A087WW87 121 aaPredicted RBP0.09□□□□□ -2.4
RBM39-234ENST00000487604 IGHV1-45A0A0A0MS14 117 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 SLC5A10A0PJK1 596 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 IGSF23A1L1A6 192 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 ARRDC5A6NEK1 342 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 IGKV2D-40P01614 121 aaPredicted RBP0.09□□□□□ -2.4
RBM39-234ENST00000487604 ZNF705DP0CH99 300 aaPredicted RBP0.09□□□□□ -2.4
RBM39-234ENST00000487604 ZNF705BP0CI00 300 aaPredicted RBP0.09□□□□□ -2.4
RBM39-234ENST00000487604 HTR4Q13639 388 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 TOMM34Q15785 309 aaPredicted RBP0.09□□□□□ -2.4
RBM39-234ENST00000487604 FAM229BQ4G0N7 80 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 ERICH5Q6P6B1 374 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 EIF3MQ7L2H7 374 aaKnown RBP0.09□□□□□ -2.4
RBM39-234ENST00000487604 NT5CQ8TCD5 201 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 TCP10LQ8TDR4 215 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 C22orf15Q8WYQ4 148 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 TMIGD2Q96BF3 282 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 RILPQ96NA2 401 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 C20orf144Q9BQM9 153 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 ULBP1Q9BZM6 244 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 ZC4H2Q9NQZ6 224 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 BTRCQ9Y297 605 aa0.09□□□□□ -2.4
RBM39-234ENST00000487604 POLR3AO14802 1390 aaPredicted RBP0.08□□□□□ -2.4
RBM39-234ENST00000487604 FAM240AA0A1B0GVK7 77 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 CPLX1O14810 134 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 RLN2P04090 185 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 EVI2BP34910 448 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 XKP51811 444 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 SPANXN2Q5MJ10 180 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 GALNT10Q86SR1 603 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 OR6K3Q8NGY3 331 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 ERMNQ8TAM6 284 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 CPB2Q96IY4 423 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 OLFM3Q96PB7 478 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 OR2M4Q96R27 311 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 ANAPC13Q9BS18 74 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 C6orf50Q9HD87 102 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 SDHAF3Q9NRP4 125 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 TBC1D24Q9ULP9 559 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 TMCC3Q9ULS5 477 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 ANGPT4Q9Y264 503 aa0.08□□□□□ -2.4
RBM39-234ENST00000487604 ATRNO75882 1429 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 A8MWP6 167 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 ZNF701M0R085 212 aaPredicted RBP0.07□□□□□ -2.4
RBM39-234ENST00000487604 HCRTO43612 131 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 PEBP1P30086 187 aaKnown RBP0.07□□□□□ -2.4
RBM39-234ENST00000487604 HCCSP53701 268 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 MLF1P58340 268 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 PLCXD2Q0VAA5 305 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 DNAJC3Q13217 504 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 WDR43Q15061 677 aaKnown RBP eCLIP0.07□□□□□ -2.4
RBM39-234ENST00000487604 MMDQ15546 238 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 TPRG1LQ5T0D9 272 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 SETD3Q86TU7 594 aaPredicted RBP0.07□□□□□ -2.4
RBM39-234ENST00000487604 INO80EQ8NBZ0 244 aaPredicted RBP0.07□□□□□ -2.4
RBM39-234ENST00000487604 TSEN15Q8WW01 171 aaKnown RBP0.07□□□□□ -2.4
RBM39-234ENST00000487604 PLIN2Q99541 437 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 TIMM21Q9BVV7 248 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 SHCBP1LQ9BZQ2 653 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 DDX18Q9NVP1 670 aaKnown RBP0.07□□□□□ -2.4
RBM39-234ENST00000487604 NAV2Q8IVL1 2488 aa0.07□□□□□ -2.4
RBM39-234ENST00000487604 SBNO1A3KN83 1393 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 POLEQ07864 2286 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 VPS37CA5D8V6 355 aaPredicted RBP0.06□□□□□ -2.4
RBM39-234ENST00000487604 UPK2O00526 184 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 SIVA1O15304 175 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 ALOX5APP20292 161 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 IDI1Q13907 227 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 OR8G1Q15617 311 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 TRAM1L1Q8N609 369 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 KRTCAP2Q8N6L1 136 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 OR52K1Q8NGK4 314 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 CD200R1Q8TD46 325 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 TWIST2Q8WVJ9 160 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 OR8D1Q8WZ84 308 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 ISOC2Q96AB3 205 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 FAM192AQ9GZU8 254 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 COA1Q9GZY4 146 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 LYRM4Q9HD34 91 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 VCX3AQ9NNX9 186 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 KCNIP2Q9NS61 270 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 BABAM2Q9NXR7 383 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 PRO2289Q9P1D8 64 aa0.06□□□□□ -2.4
RBM39-234ENST00000487604 USP42Q9H9J4 1324 aaKnown RBP0.06□□□□□ -2.4
RBM39-234ENST00000487604 YLPM1P49750 1951 aaKnown RBP0.05□□□□□ -2.4
RBM39-234ENST00000487604 IGKV3D-7A0A0C4DH55 119 aa0.05□□□□□ -2.4
RBM39-234ENST00000487604 IGKV3OR2-268A0A0C4DH90 116 aa0.05□□□□□ -2.4
RBM39-234ENST00000487604 CECR9P0C854 216 aa0.05□□□□□ -2.4
RBM39-234ENST00000487604 CD36P16671 472 aa0.05□□□□□ -2.4
RBM39-234ENST00000487604 CLDN18P56856 261 aa0.05□□□□□ -2.4
RBM39-234ENST00000487604 RWDD2BP57060 319 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms