RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 RAB40AQ8WXH6 277 aa10.56□□□□□ -0.72
PRDM2-208ENST00000487453 NICN1Q9BSH3 213 aa10.56□□□□□ -0.72
PRDM2-208ENST00000487453 DCTN5Q9BTE1 182 aa10.56□□□□□ -0.72
PRDM2-208ENST00000487453 URM1Q9BTM9 101 aaKnown RBP10.56□□□□□ -0.72
PRDM2-208ENST00000487453 MRI1Q9BV20 369 aa10.56□□□□□ -0.72
PRDM2-208ENST00000487453 SEBOXQ9HB31 216 aaPredicted RBP10.56□□□□□ -0.72
PRDM2-208ENST00000487453 ONECUT1Q9UBC0 465 aa10.56□□□□□ -0.72
PRDM2-208ENST00000487453 POLR3KQ9Y2Y1 108 aaPredicted RBP10.56□□□□□ -0.72
PRDM2-208ENST00000487453 TRBV23-1A0A0A0MS06 115 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 TRAV24A0A0B4J272 114 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 PPIAL4CA0A0B4J2A2 164 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 TMEM272A0A1B0GTI8 110 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 MEX3AA1L020 520 aaKnown RBP10.55□□□□□ -0.72
PRDM2-208ENST00000487453 PPIAL4GP0DN37 164 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
PRDM2-208ENST00000487453 GATA3P23771 443 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 LMO1P25800 156 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 RPS19P39019 145 aaKnown RBP10.55□□□□□ -0.72
PRDM2-208ENST00000487453 RPL31P62899 125 aaKnown RBP10.55□□□□□ -0.72
PRDM2-208ENST00000487453 QRFPP83859 136 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 NKAPLQ5M9Q1 402 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 RAB12Q6IQ22 244 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 USP43Q70EL4 1123 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 CROCCP3Q8IVE0 287 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 BPIFB2Q8N4F0 458 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 TPRX1Q8N7U7 411 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 SUMF2Q8NBJ7 301 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 LGALS14Q8TCE9 139 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 DPCDQ9BVM2 203 aaPredicted RBP10.55□□□□□ -0.72
PRDM2-208ENST00000487453 SHARPINQ9H0F6 387 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 DCSTAMPQ9H295 470 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 IFT22Q9H7X7 185 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 SPACA1Q9HBV2 294 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 C19orf12Q9NSK7 152 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 INSIG2Q9Y5U4 225 aa10.55□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A10PA6NDY2 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A18PA6NE21 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A16PA6NEW6 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A20PA6NIJ5 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A22PA8MWA6 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A12PA8MX19 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A5PA8MXJ8 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 MCRIP1C9JLW8 97 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 PAHP00439 452 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 CSN2P05814 226 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 LIPFP07098 398 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A15PP0C7V4 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A13PP0C7W8 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A14PP0C7W9 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 FAM90A24PP0C7X0 464 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 TMBIM6P55061 237 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 P2RX3P56373 397 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 PAX2Q02962 417 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 AESQ08117 197 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 PLA2G7Q13093 441 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 CR1LQ2VPA4 569 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 C11orf91Q3C1V1 193 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 KRBOX4Q5JUW0 171 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 BRICD5Q6PL45 260 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 IL17RELQ6ZVW7 336 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 TRAPPC6BQ86SZ2 158 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 SLC25A46Q96AG3 418 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 NEDD4LQ96PU5 975 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 TM2D1Q9BX74 207 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 LPAR5Q9H1C0 372 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 C7orf69Q9H7B7 122 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 PEX16Q9Y5Y5 336 aa10.54□□□□□ -0.72
PRDM2-208ENST00000487453 KIR2DS1A0A191URI9 304 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 A0A1W2PPH5 198 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 FUOMA2VDF0 154 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 J3QLI3 93 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 LDLRAD4O15165 306 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 PDCD6O75340 191 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 RAB6AP20340 208 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 HNF1AP20823 631 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 BLVRBP30043 206 aaPredicted RBP10.53□□□□□ -0.72
PRDM2-208ENST00000487453 VEGFCP49767 419 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 EFNB2P52799 333 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 RBM39Q14498 530 aaKnown RBP10.53□□□□□ -0.72
PRDM2-208ENST00000487453 METTL11BQ5VVY1 283 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 CMTM4Q8IZR5 234 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 C8orf46Q8TAG6 207 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 PLPPR1Q8TBJ4 325 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 DACT3Q96B18 629 aaPredicted RBP10.53□□□□□ -0.72
PRDM2-208ENST00000487453 ISOC1Q96CN7 298 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 BCL7BQ9BQE9 202 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 PCGF1Q9BSM1 259 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 TMPRSS13Q9BYE2 586 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 ATG5Q9H1Y0 275 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 RCC2Q9P258 522 aaKnown RBP10.53□□□□□ -0.72
PRDM2-208ENST00000487453 FBLN5Q9UBX5 448 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 LPAR3Q9UBY5 353 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 RAB22AQ9UL26 194 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 AUP1Q9Y679 476 aa10.53□□□□□ -0.72
PRDM2-208ENST00000487453 ZNF469Q96JG9 3925 aaPredicted RBP10.52□□□□□ -0.73
PRDM2-208ENST00000487453 MEIKINA0A087WXM9 373 aa10.52□□□□□ -0.73
PRDM2-208ENST00000487453 A0A0A6YYD4 124 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms