RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ABHD14BQ96IU4 210 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 GLRX2Q9NS18 164 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 DOK5Q9P104 306 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 CA14Q9ULX7 337 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 UBE2J1Q9Y385 318 aaPredicted RBP10.54□□□□□ -0.72
COL3A1-206ENST00000487010 KIAA1549Q9HCM3 1950 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ZIC3O60481 467 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 SCAF4O95104 1147 aaKnown RBP10.53□□□□□ -0.72
COL3A1-206ENST00000487010 SLC34A2O95436 690 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 HSPB1P04792 205 aaKnown RBP10.53□□□□□ -0.72
COL3A1-206ENST00000487010 CST2P09228 141 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 SRFP11831 508 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 FUT3P21217 361 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 CEBPGP53567 150 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 DSCR4P56555 118 aaPredicted RBP10.53□□□□□ -0.72
COL3A1-206ENST00000487010 VAMP2P63027 116 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 KRTAP27-1Q3LI81 207 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 PYY3Q5JQD4 70 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 CXorf66Q5JRM2 361 aaPredicted RBP10.53□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF343Q6P1L6 599 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 TBC1D26Q86UD7 250 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 ODF3L1Q8IXM7 274 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF610Q8N9Z0 462 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 OR5C1Q8NGR4 320 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 GNPNAT1Q96EK6 184 aaPredicted RBP10.53□□□□□ -0.72
COL3A1-206ENST00000487010 TVP23CQ96ET8 276 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 JSRP1Q96MG2 331 aaPredicted RBP10.53□□□□□ -0.72
COL3A1-206ENST00000487010 MAGT1Q9H0U3 335 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF442Q9H7R0 627 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 SLC7A11Q9UPY5 501 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 SPEGQ15772 3267 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 A0A0J9YW62 118 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 CXorf65A6NEN9 183 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 OR6C6A6NF89 314 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 TNFSF11O14788 317 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 YKT6O15498 198 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 ADAM20O43506 726 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 LIFP15018 202 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 S100A2P29034 98 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 DYNLT3P51808 116 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 CYB561D1Q8N8Q1 229 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 PROK2Q9HC23 129 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 SIRT7Q9NRC8 400 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 SLC7A10Q9NS82 523 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 P4HTMQ9NXG6 502 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 TREM2Q9NZC2 230 aa10.53□□□□□ -0.72
COL3A1-206ENST00000487010 CELA2AP08217 269 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 CCL3P10147 92 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 CEACAM1P13688 526 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 MMP9P14780 707 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF32P17041 273 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 EPHA1P21709 976 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 ERVFRD-1P60508 538 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 DAZAP2Q15038 168 aaPredicted RBP10.52□□□□□ -0.73
COL3A1-206ENST00000487010 PCOLCEQ15113 449 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 SRXN1Q9BYN0 137 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 AKIRIN1Q9H9L7 192 aaPredicted RBP10.52□□□□□ -0.73
COL3A1-206ENST00000487010 FAM86C1Q9NVL1 165 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 TMEM38BQ9NVV0 291 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 PARPBPQ9NWS1 579 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 GAR1Q9NY12 217 aaKnown RBP10.52□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF391Q9UJN7 358 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 DKKL1Q9UK85 242 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 WSB1Q9Y6I7 421 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 ASCC3Q8N3C0 2202 aaKnown RBP10.52□□□□□ -0.73
COL3A1-206ENST00000487010 BRWD1Q9NSI6 2320 aa10.52□□□□□ -0.73
COL3A1-206ENST00000487010 TGIF2-C20orf24A0A0A6YYL0 155 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 hCG_38984A0A1B0GV85 526 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 CLEC18AA5D8T8 446 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 BCAT2O15382 392 aaPredicted RBP10.51□□□□□ -0.73
COL3A1-206ENST00000487010 CST7O76096 145 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 OR7C1O76099 320 aaPredicted RBP10.51□□□□□ -0.73
COL3A1-206ENST00000487010 PATE4P0C8F1 98 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 RD3LP0DJH9 198 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 GLIPR1P48060 266 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 RGS19P49795 217 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 ID3Q02535 119 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF92Q03936 586 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 BAXQ07812 192 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 SPIN3Q5JUX0 258 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 AKR1C8PQ5T2L2 129 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 PLCXD3Q63HM9 321 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 MRPL14Q6P1L8 145 aaKnown RBP10.51□□□□□ -0.73
COL3A1-206ENST00000487010 SLC35E3Q7Z769 313 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 WDR5BQ86VZ2 330 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 IL22RA1Q8N6P7 574 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 CLEC18CQ8NCF0 446 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 CLDND2Q8NHS1 167 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 PIGCQ92535 297 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 RBMXL1Q96E39 390 aaKnown RBP10.51□□□□□ -0.73
COL3A1-206ENST00000487010 SIGLEC12Q96PQ1 595 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 NIPSNAP3BQ9BS92 247 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 SF3B5Q9BWJ5 86 aaKnown RBP10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIPK2Q9H2X6 1198 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 OPA3Q9H6K4 179 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 CRLF2Q9HC73 371 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 NOSIPQ9Y314 301 aaKnown RBP10.51□□□□□ -0.73
COL3A1-206ENST00000487010 LAMA1P25391 3075 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms