RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MPC1Q9Y5U8 109 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 COMMD3-BMI1R4GMX3 469 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 KIAA2026Q5HYC2 2103 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 hCG_38984A0A1B0GV85 526 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A1W2PQ09 198 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A1W2PRD5 423 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 DHRS12A0PJE2 317 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 NKX6-3A6NJ46 265 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 ANXA2P2A6NMY6 339 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR2AT4A6NND4 320 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 H0YAE9 185 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SIGLEC5O15389 551 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 CCDC22O60826 627 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 GMNNO75496 209 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 GLCEO94923 617 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 CST4P01036 141 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SEMG1P04279 462 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SPARCP09486 303 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC2A1P11166 492 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 PSKH1P11801 424 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SELLP14151 372 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 POU1F1P28069 291 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 CX3CR1P49238 355 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 LUMP51884 338 aaPredicted RBP3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC25A1P53007 311 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 DLX1P56177 255 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 PSME3P61289 254 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 CSNK2BP67870 215 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SPIBQ01892 262 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 PRB3Q04118 309 aaPredicted RBP3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 KLRD1Q13241 179 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 LY6EQ16553 131 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 DGUOKQ16854 277 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 KLHL12Q53G59 568 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 VAX1Q5SQQ9 334 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 CGB2Q6NT52 195 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 KRT74Q7RTS7 529 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 CPLX4Q7Z7G2 160 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 GTSCR1Q86UQ5 136 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 NDUFA11Q86Y39 141 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 Q8N2B8 174 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 PNKDQ8N490 385 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 LINC00471Q8N535 108 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM86B1Q8N7N1 296 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC37A3Q8NCC5 494 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 PAPD5Q8NDF8 572 aaKnown RBP3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 WFDC9Q8NEX5 89 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR4F17Q8NGA8 305 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR4S1Q8NGB4 309 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR5T2Q8NGG2 359 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR52L1Q8NGH7 329 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR51L1Q8NGJ5 315 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR51G2Q8NGK0 314 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR5K1Q8NHB7 308 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 PIFOQ8TCI5 191 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 RNF133Q8WVZ7 376 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 C17orf50Q8WW18 174 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR5P3Q8WZ94 311 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 H1FXQ92522 213 aaKnown RBP3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SGCDQ92629 289 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 ITFG2Q969R8 447 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 MCUR1Q96AQ8 359 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 SEH1LQ96EE3 360 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 DUS3LQ96G46 650 aaKnown RBP3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 GRAMD2BQ96HH9 432 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 REEP6Q96HR9 211 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 PYURFQ96I23 114 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 GAFA1Q96PS6 74 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 OR4F4Q96R69 305 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 RTL8AQ9BWD3 113 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 PAPOLGQ9BWT3 736 aaKnown RBP3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 CDCA4Q9BXL8 241 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 NMNAT2Q9BZQ4 307 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 WDR13Q9H1Z4 485 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 HEXA-AS1Q9H8Q6 139 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF391Q9UJN7 358 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 BAIAP2Q9UQB8 552 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 RHBDD3Q9Y3P4 386 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 CDH10Q9Y6N8 788 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 COL7A1Q02388 2944 aa3.16□□□□□ -1.9
SNRNP40-205ENST00000486941 IGKV1D-17A0A075B6S4 117 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 hCG_1809904A0A1W2PP81 198 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 A0A1W2PPE2 198 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 A0A1W2PPH5 198 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 A0A1W2PR64 198 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 A0A1W2PRV1 198 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF850A8MQ14 1090 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 VGLL3A8MV65 326 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 AKR7A2O43488 359 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 ANGPTL7O43827 346 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 CHST1O43916 411 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 PEX14O75381 377 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 IFNGP01579 166 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 FABP3P05413 133 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 GYPBP06028 91 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 PSG2P11465 335 aa3.15□□□□□ -1.91
SNRNP40-205ENST00000486941 HSD17B1P14061 328 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 275 ms