RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SMIM19Q96E16 107 aa14.31□□□□□ -0.12
COL6A1-204ENST00000486023 SEBOXQ9HB31 216 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-204ENST00000486023 SESN1Q9Y6P5 492 aa14.31□□□□□ -0.12
COL6A1-204ENST00000486023 PKD1L1Q8TDX9 2849 aa14.31□□□□□ -0.12
COL6A1-204ENST00000486023 EFCAB10A6NFE3 127 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 SLC33A1O00400 549 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-204ENST00000486023 CLPXO76031 633 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 RBP4P02753 201 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 JUNBP17275 347 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-204ENST00000486023 CDK2P24941 298 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 ERP29P30040 261 aaKnown RBP14.3□□□□□ -0.12
COL6A1-204ENST00000486023 MTNR1BP49286 362 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 SLC34A1Q06495 639 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 DDI2Q5TDH0 399 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 OR52N1Q8NH53 320 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 S100A13Q99584 98 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 TMEM133Q9H2Q1 129 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 GAL3ST2Q9H3Q3 398 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 ZNF696Q9H7X3 374 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 TCF7L1Q9HCS4 588 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 NKX1-2Q9UD57 310 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-204ENST00000486023 UBE2J1Q9Y385 318 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-204ENST00000486023 TBL2Q9Y4P3 447 aaKnown RBP14.3□□□□□ -0.12
COL6A1-204ENST00000486023 HSPE1-MOB4S4R3N1 261 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 MGAM2Q2M2H8 2515 aa14.3□□□□□ -0.12
COL6A1-204ENST00000486023 IGHV2-26A0A0B4J1V2 119 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 MYL12BO14950 172 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 CASQ2O14958 399 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-204ENST00000486023 LMO1P25800 156 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 C21orf33P30042 268 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-204ENST00000486023 BDKRB2P30411 391 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 GABRA5P31644 462 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 ZNF93P35789 620 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-204ENST00000486023 PIGYQ3MUY2 71 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 PAN3Q58A45 887 aaKnown RBP14.29□□□□□ -0.12
COL6A1-204ENST00000486023 PRR31Q5SQ13 230 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 LDLRAD2Q5SZI1 272 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 ZNF626Q68DY1 528 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 LAIR2Q6ISS4 152 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 TREML4Q6UXN2 200 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 TMEM219Q86XT9 240 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 OR11H6Q8NGC7 330 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 MALSU1Q96EH3 234 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 CLEC7AQ9BXN2 247 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 PPIL3Q9H2H8 161 aaKnown RBP14.29□□□□□ -0.12
COL6A1-204ENST00000486023 DCLRE1BQ9H816 532 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 RHOFQ9HBH0 211 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 TMEM138Q9NPI0 162 aa14.29□□□□□ -0.12
COL6A1-204ENST00000486023 ODAMA1E959 279 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 FAM90A8PA6NJQ4 464 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 ODF3BA8MYP8 253 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 PTGES3LE9PB15 166 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 TSPAN9O75954 239 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 NFYBP25208 207 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 PTGFRP43088 359 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 PROK1P58294 105 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 RIPK1Q13546 671 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 HIST2H2BDQ6DRA6 164 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 DMKNQ6E0U4 476 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-204ENST00000486023 ZNF529Q6P280 563 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 ABHD12Q8N2K0 398 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 CHST4Q8NCG5 386 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 PXT1Q8NFP0 134 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 OR4C13Q8NGP0 309 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 PIFOQ8TCI5 191 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 METTL9Q9H1A3 318 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 C16orf95Q9H693 158 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 CKLFQ9UBR5 152 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 PSORS1C1Q9UIG5 152 aa14.28□□□□□ -0.12
COL6A1-204ENST00000486023 MEIKINA0A087WXM9 373 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 ERICH4A6NGS2 130 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 TOR1AO14656 332 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 CHST1O43916 411 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 CSTBP04080 98 aaKnown RBP14.27□□□□□ -0.13
COL6A1-204ENST00000486023 MAS1P04201 325 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 CELP19835 753 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 SERPINA2P20848 420 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 GDNFP39905 211 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 GLP1RP43220 463 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 LTC4SQ16873 150 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 C11orf44Q8N8P7 122 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 OR4D6Q8NGJ1 314 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 RPS4Y2Q8TD47 263 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 FOXRED1Q96CU9 486 aaPredicted RBP14.27□□□□□ -0.13
COL6A1-204ENST00000486023 COQ2Q96H96 371 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 OR14A2Q96R54 314 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 CITED1Q99966 193 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 RAB18Q9NP72 206 aa14.27□□□□□ -0.13
COL6A1-204ENST00000486023 CNOT2Q9NZN8 540 aaKnown RBP14.27□□□□□ -0.13
COL6A1-204ENST00000486023 TRRAPQ9Y4A5 3859 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 TRAV39A0A0B4J263 110 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 TRAV24A0A0B4J272 114 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 F2RL2O00254 374 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 OR7C1O76099 320 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-204ENST00000486023 IGHV3-7P01780 117 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 ALDOBP05062 364 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 HTR1DP28221 377 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 RBM39Q14498 530 aaKnown RBP14.26□□□□□ -0.13
COL6A1-204ENST00000486023 AANATQ16613 207 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 Q499Y3 187 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 841.9 ms