RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 CARHSP1Q9Y2V2 147 aaKnown RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 R4GN57 208 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 U3KQ87 197 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 SIPA1L3O60292 1781 aaPredicted RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 LTN1O94822 1766 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 PARP4Q9UKK3 1724 aaKnown RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 LAMA4Q16363 1823 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 PTPRJQ12913 1337 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 IGSF9BQ9UPX0 1349 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 FAM240AA0A1B0GVK7 77 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 TMEM218A2RU14 115 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 MPTX1A8MV57 137 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 J3KT08 172 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 M0R1B8 84 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 BUB3O43684 328 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 MFSD11O43934 449 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 GNG7O60262 68 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 FKBP6O75344 327 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 STK16O75716 305 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 WISP2O76076 250 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 HPNP05981 417 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ACP2P11117 423 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 PSG1P11464 419 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 MYOD1P15172 320 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 PAX1P15863 534 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 HIST1H1BP16401 226 aaKnown RBP3.77□□□□□ -1.81
RTN4-213ENST00000485749 GM2AP17900 193 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ATF1P18846 271 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 FGF7P21781 194 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 TFPI2P48307 235 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 KLK7P49862 253 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ZNF133P52736 654 aaPredicted RBP3.77□□□□□ -1.81
RTN4-213ENST00000485749 TAS2R30P59541 319 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 HSPE1P61604 102 aaKnown RBP3.77□□□□□ -1.81
RTN4-213ENST00000485749 CDK5Q00535 292 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 TCP10Q12799 353 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 TAF10Q12962 218 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 GPR18Q14330 331 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 LAGE3Q14657 143 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 CLINT1Q14677 625 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 RAB35Q15286 201 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 IL17AQ16552 155 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 PABPC1L2AQ5JQF8 200 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 FAM162BQ5T6X4 162 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 RSBN1Q5VWQ0 802 aaPredicted RBP3.77□□□□□ -1.81
RTN4-213ENST00000485749 ANKRD22Q5VYY1 191 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 SLC18B1Q6NT16 456 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ARL9Q6T311 187 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ZNF730Q6ZMV8 503 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 OAFQ86UD1 273 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 CALHM3Q86XJ0 350 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 PGBD5Q8N414 524 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 OR51A2Q8NGJ7 313 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 OR9I1Q8NGQ6 314 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 OR51Q1Q8NH59 317 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ZNRF2Q8NHG8 242 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ZPLD1Q8TCW7 415 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ACOT12Q8WYK0 555 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 PPCDCQ96CD2 204 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 ISOC1Q96CN7 298 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 SLC35G5Q96KT7 338 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 PGLYRP3Q96LB9 341 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 MS4A4EQ96PG1 132 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 RNF157Q96PX1 679 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 SORT1Q99523 831 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 C20orf144Q9BQM9 153 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 LXNQ9BS40 222 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 DOHHQ9BU89 302 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 COA1Q9GZY4 146 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 GLIPR2Q9H4G4 154 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 CWH43Q9H720 699 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 CACYBPQ9HB71 228 aaKnown RBP3.77□□□□□ -1.81
RTN4-213ENST00000485749 IDI2-AS1Q9NZ38 188 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 Q9UF83 564 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 NWD2Q9ULI1 1742 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 C1orf167Q5SNV9 1468 aa3.77□□□□□ -1.81
RTN4-213ENST00000485749 COL22A1Q8NFW1 1626 aaPredicted RBP3.77□□□□□ -1.81
RTN4-213ENST00000485749 LAMB4A4D0S4 1761 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 ARFGEF2Q9Y6D5 1785 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 MEGF6O75095 1541 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 C5P01031 1676 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 SRRM4A7MD48 611 aaKnown RBP3.76□□□□□ -1.81
RTN4-213ENST00000485749 TCP10L2B9ZVM9 353 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 TMEM178BH3BS89 294 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 OR7C2O60412 319 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 C1QL1O75973 258 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 MRPL3P09001 348 aaKnown RBP3.76□□□□□ -1.81
RTN4-213ENST00000485749 H2AFZP0C0S5 128 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 CD37P11049 281 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 CYBAP13498 195 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 ZNF250P15622 560 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 RPL35AP18077 110 aaKnown RBP3.76□□□□□ -1.81
RTN4-213ENST00000485749 TCN2P20062 427 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 CMPK1P30085 196 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 GPR183P32249 361 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 GLRXP35754 106 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 OPRL1P41146 370 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 NR4A2P43354 598 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 OR1D4P47884 311 aa3.76□□□□□ -1.81
RTN4-213ENST00000485749 RPL27P61353 136 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms