RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.62□□□□□ -1.99
SRRM1-213ENST00000485441 RORBQ92753 470 aa2.62□□□□□ -1.99
SRRM1-213ENST00000485441 YIPF5Q969M3 257 aa2.62□□□□□ -1.99
SRRM1-213ENST00000485441 CATSPER2Q96P56 530 aa2.62□□□□□ -1.99
SRRM1-213ENST00000485441 TRNT1Q96Q11 434 aaKnown RBP2.62□□□□□ -1.99
SRRM1-213ENST00000485441 PITX2Q99697 317 aa2.62□□□□□ -1.99
SRRM1-213ENST00000485441 SUCNR1Q9BXA5 334 aa2.62□□□□□ -1.99
SRRM1-213ENST00000485441 ZNF436Q9C0F3 470 aaPredicted RBP2.62□□□□□ -1.99
SRRM1-213ENST00000485441 ZNF780BQ9Y6R6 833 aa2.62□□□□□ -1.99
SRRM1-213ENST00000485441 NUP153P49790 1475 aaKnown RBP2.62□□□□□ -1.99
SRRM1-213ENST00000485441 YLPM1P49750 1951 aaKnown RBP2.61□□□□□ -1.99
SRRM1-213ENST00000485441 ZSWIM8A7E2V4 1837 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 IGKV1D-17A0A075B6S4 117 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 CD300LBA8K4G0 201 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 CRXO43186 299 aaPredicted RBP2.61□□□□□ -1.99
SRRM1-213ENST00000485441 PDCD6O75340 191 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 IGKV1-17P01599 117 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 SOD3P08294 240 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 RPA3P35244 121 aaPredicted RBP2.61□□□□□ -1.99
SRRM1-213ENST00000485441 NUDT2P50583 147 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 PLTPP55058 493 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 RPS11P62280 158 aaKnown RBP eCLIP2.61□□□□□ -1.99
SRRM1-213ENST00000485441 SLAMF1Q13291 335 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 ENDOGQ14249 297 aaKnown RBP2.61□□□□□ -1.99
SRRM1-213ENST00000485441 UBE2NLQ5JXB2 153 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 ZFAND6Q6FIF0 208 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 FAM183BPQ6ZVS7 135 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
SRRM1-213ENST00000485441 MARCH3Q86UD3 253 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 LRRC6Q86X45 466 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 FAM9CQ8IZT9 166 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 OR8S1Q8NH09 359 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 ACTL9Q8TC94 416 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 FXYD5Q96DB9 178 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 OLFM3Q96PB7 478 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 LLPHQ9BRT6 129 aaKnown RBP2.61□□□□□ -1.99
SRRM1-213ENST00000485441 BBS2Q9BXC9 721 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 TRIM45Q9H8W5 580 aaPredicted RBP2.61□□□□□ -1.99
SRRM1-213ENST00000485441 INIPQ9NRY2 104 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 FADS3Q9Y5Q0 445 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 CACNA1DQ01668 2161 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 SHROOM3Q8TF72 1996 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 KIAA0232Q92628 1395 aa2.61□□□□□ -1.99
SRRM1-213ENST00000485441 ARAP3Q8WWN8 1544 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 IGHV3-43A0A0B4J1X8 118 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 CGB3P0DN86 165 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 CGB7P0DN87 165 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 ZNF235Q14590 738 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 OR4D1Q15615 310 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 CCDC122Q5T0U0 273 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 LAMTOR1Q6IAA8 161 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 TMEM144Q7Z5S9 345 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 SELENOHQ8IZQ5 122 aaKnown RBP2.6□□□□□ -1.99
SRRM1-213ENST00000485441 ZIC4Q8N9L1 334 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 ZNF680Q8NEM1 530 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 OR4C13Q8NGP0 309 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 OR6K3Q8NGY3 331 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 CCDC12Q8WUD4 166 aaPredicted RBP2.6□□□□□ -1.99
SRRM1-213ENST00000485441 ARL5BQ96KC2 179 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 HBEGFQ99075 208 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 LINC01587Q99440 93 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 PARVGQ9HBI0 331 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 ZNF492Q9P255 531 aa2.6□□□□□ -1.99
SRRM1-213ENST00000485441 TRAV8-3A0A0A6YYJ7 113 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 OR6C70A6NIJ9 312 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 M0QXV9 152 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 UBDO15205 165 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 TCF21O43680 179 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 CBR3O75828 277 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 SLC2A1P11166 492 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 PTHLHP12272 177 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 PRTN3P24158 256 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 TPM4P67936 248 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 HBG1P69891 147 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 HBG2P69892 147 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 PRKCDQ05655 676 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 COTL1Q14019 142 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 TMEM241Q24JQ0 296 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 CLEC20AQ6ZU45 233 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 AMN1Q8IY45 258 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 ZFP82Q8N141 532 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 PHF10Q8WUB8 498 aaKnown RBP2.59□□□□□ -1.99
SRRM1-213ENST00000485441 GTF2H4Q92759 462 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 CYTH2Q99418 400 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 SHANK2-AS3Q9BTD1 123 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 PLA2G12AQ9BZM1 189 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 MS4A12Q9NXJ0 267 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 ZNF586Q9NXT0 402 aa2.59□□□□□ -1.99
SRRM1-213ENST00000485441 V9GYY5 206 aaPredicted RBP2.59□□□□□ -1.99
SRRM1-213ENST00000485441 IGHV2-26A0A0B4J1V2 119 aa2.58□□□□□ -2
SRRM1-213ENST00000485441 FAM183AA6NL82 134 aa2.58□□□□□ -2
SRRM1-213ENST00000485441 H3BP45 60 aa2.58□□□□□ -2
SRRM1-213ENST00000485441 MKRN2OSH3BPM6 223 aa2.58□□□□□ -2
SRRM1-213ENST00000485441 H3BQ85 93 aa2.58□□□□□ -2
SRRM1-213ENST00000485441 SCN2BO60939 215 aa2.58□□□□□ -2
SRRM1-213ENST00000485441 NDUFS6O75380 124 aaKnown RBP2.58□□□□□ -2
SRRM1-213ENST00000485441 CDK14O94921 469 aa2.58□□□□□ -2
SRRM1-213ENST00000485441 TPM3P06753 285 aa2.58□□□□□ -2
SRRM1-213ENST00000485441 ELK4P28324 431 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms