RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ING4Q9UNL4 249 aa14.58□□□□□ -0.08
SREBF1-213ENST00000485080 hCG_1809904A0A1W2PP81 198 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 A0A1W2PPE2 198 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 A0A1W2PR64 198 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 A0A1W2PRV1 198 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 hADV38S2A0JD32 116 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 FUOMA2VDF0 154 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 C17orf98A8MV24 154 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 SIRPB1O00241 398 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 HTR3BO95264 441 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 CSTBP04080 98 aaKnown RBP14.57□□□□□ -0.08
SREBF1-213ENST00000485080 GTF2F2P13984 249 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 ZNF44P15621 663 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 KCNJ3P48549 501 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 SNU13P55769 128 aaKnown RBP14.57□□□□□ -0.08
SREBF1-213ENST00000485080 P2RX3P56373 397 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 RBM11P57052 281 aaKnown RBP14.57□□□□□ -0.08
SREBF1-213ENST00000485080 FABP5Q01469 135 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 ZNF273Q14593 569 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 BCL6BQ8N143 479 aaPredicted RBP14.57□□□□□ -0.08
SREBF1-213ENST00000485080 OR4D6Q8NGJ1 314 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 OR10K1Q8NGX5 313 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 TMEM158Q8WZ71 300 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 MUL1Q969V5 352 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 NKX3-1Q99801 234 aaPredicted RBP14.57□□□□□ -0.08
SREBF1-213ENST00000485080 SLITRK2Q9H156 845 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 ST3GAL6Q9Y274 331 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 MRPS28Q9Y2Q9 187 aaKnown RBP14.57□□□□□ -0.08
SREBF1-213ENST00000485080 LINC00312Q9Y6C7 94 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 KIAA2026Q5HYC2 2103 aa14.57□□□□□ -0.08
SREBF1-213ENST00000485080 IGHV3OR16-10A0A075B7F0 116 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 TRAV24A0A0B4J272 114 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 RNASEK-C17orf49H0YIS7 233 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 VENTXO95231 258 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 UBBP0CG47 229 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 ZNF728P0DKX0 622 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 UBE2E1P51965 193 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 EDDM3BP56851 147 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 MPV17LQ2QL34 196 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 PIGYQ3MUY2 71 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 SLC22A6Q4U2R8 563 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 GLT8D1Q68CQ7 371 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 GLIPR1L1Q6UWM5 242 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 TCF23Q7RTU1 214 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 C22orf15Q8WYQ4 148 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 CORO2AQ92828 525 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 ZNF48Q96MX3 618 aaPredicted RBP14.56□□□□□ -0.08
SREBF1-213ENST00000485080 CHST6Q9GZX3 395 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 SIRT7Q9NRC8 400 aa14.56□□□□□ -0.08
SREBF1-213ENST00000485080 UBE2J1Q9Y385 318 aaPredicted RBP14.56□□□□□ -0.08
SREBF1-213ENST00000485080 TRDV1A0A1B0GX56 115 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A10PA6NDY2 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A18PA6NE21 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A16PA6NEW6 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A20PA6NIJ5 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A8PA6NJQ4 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A7PA6NKC0 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A22PA8MWA6 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A12PA8MX19 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A5PA8MXJ8 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A23PA8MXZ1 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 CLDN34H7C241 214 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 CCRL2O00421 344 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A15PP0C7V4 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A13PP0C7W8 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A14PP0C7W9 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 FAM90A24PP0C7X0 464 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 AWAT2Q6E213 333 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 HCP5Q6MZN7 132 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 RBMS3Q6XE24 437 aaKnown RBP14.55□□□□□ -0.08
SREBF1-213ENST00000485080 BRD3OSQ6XYD6 125 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 SIGLECL1Q8N7X8 197 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 NR1H4Q96RI1 486 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-213ENST00000485080 HEXA-AS1Q9H8Q6 139 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 ANK2Q01484 3957 aa14.55□□□□□ -0.08
SREBF1-213ENST00000485080 TRAV1-2A0A0B4J238 106 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 SLC22A1O15245 554 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 CCL3L1P16619 93 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 SERPINA2P20848 420 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 PSMD7P51665 324 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 SCN1BQ07699 218 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 EDDM3AQ14507 147 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 SYT6Q5T7P8 510 aaPredicted RBP14.54□□□□□ -0.08
SREBF1-213ENST00000485080 ZDHHC22Q8N966 263 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 COQ2Q96H96 371 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 ZNF714Q96N38 554 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 PPA2Q9H2U2 334 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 ZMAT3Q9HA38 289 aaKnown RBP14.54□□□□□ -0.08
SREBF1-213ENST00000485080 SPACA1Q9HBV2 294 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 ESM1Q9NQ30 184 aa14.54□□□□□ -0.08
SREBF1-213ENST00000485080 A0A1W2PP11 408 aa14.53□□□□□ -0.08
SREBF1-213ENST00000485080 ODAMA1E959 279 aa14.53□□□□□ -0.08
SREBF1-213ENST00000485080 H3BUI4 141 aa14.53□□□□□ -0.08
SREBF1-213ENST00000485080 GEMIN2O14893 280 aaKnown RBP14.53□□□□□ -0.08
SREBF1-213ENST00000485080 RANBP1P43487 201 aa14.53□□□□□ -0.08
SREBF1-213ENST00000485080 ERVFRD-1P60508 538 aa14.53□□□□□ -0.08
SREBF1-213ENST00000485080 AESQ08117 197 aa14.53□□□□□ -0.08
SREBF1-213ENST00000485080 KRTAP24-1Q3LI83 254 aa14.53□□□□□ -0.08
SREBF1-213ENST00000485080 MIDNQ504T8 468 aa14.53□□□□□ -0.08
SREBF1-213ENST00000485080 PAN3Q58A45 887 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms