RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 JMJD1CQ15652 2540 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 TRAV24A0A0B4J272 114 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 MDFIC2A0A1B0GVS7 189 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 MEGF11A6BM72 1044 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 MGST3O14880 152 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 CSTBP04080 98 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 PRTN3P24158 256 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 HILS1P60008 231 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 ERVFRD-1P60508 538 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 NHLRC3Q5JS37 347 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 AWAT2Q6E213 333 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 HCP5Q6MZN7 132 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 TBC1D15Q8TC07 691 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 GFI1Q99684 422 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 UQCC2Q9BRT2 126 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 ST3GAL6Q9Y274 331 aa11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 FBN1P35555 2871 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-209ENST00000485035 A0A0A6YYJ9 748 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 HSPB6O14558 160 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 GEMIN2O14893 280 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF780AO75290 641 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 CSN2P05814 226 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 PSMB9P28065 219 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 ERP29P30040 261 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 P2RX3P56373 397 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 BPIFB3P59826 476 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 MEF2CQ06413 473 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 AESQ08117 197 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 BLMHQ13867 455 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 ATXN7L3Q14CW9 347 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 KRTAP24-1Q3LI83 254 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 CD200R1LQ6Q8B3 271 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 PPP1R35Q8TAP8 253 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 FCGR1BQ92637 280 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 COQ2Q96H96 371 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
SOX2-OT-209ENST00000485035 A0A1W2PPH5 198 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 A0A1W2PRD5 423 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 A0A1W2PRF3 423 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 A0A1W2PRM7 423 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 hADV38S2A0JD32 116 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 C17orf98A8MV24 154 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 CCRL2O00421 344 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 ARL6IP5O75915 188 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF728P0DKX0 622 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 CD37P11049 281 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 GTF2F2P13984 249 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 CALRP27797 417 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 GLIPR1P48060 266 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 GPR176Q14439 515 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 PAN3Q58A45 887 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 C1orf100Q5SVJ3 147 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 GLT8D1Q68CQ7 371 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 PNKDQ8N490 385 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZDHHC22Q8N966 263 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 TMEM104Q8NE00 496 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 BANF2Q9H503 90 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 IFT22Q9H7X7 185 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 ING3Q9NXR8 418 aa11.1□□□□□ -0.63
SOX2-OT-209ENST00000485035 A0A0U1RQK1 487 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 RNF212BA8MTL3 300 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 SLC22A1O15245 554 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 OR7C1O76099 320 aaPredicted RBP11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 UBE2E1P51965 193 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 GUCA2AQ02747 115 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 NCR3LG1Q68D85 454 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF782Q6ZMW2 699 aaPredicted RBP11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 LINC00596Q86U02 117 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 SUMF2Q8NBJ7 301 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 PLPPR1Q8TBJ4 325 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 FAM46BQ96A09 425 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 FOXRED1Q96CU9 486 aaPredicted RBP11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF714Q96N38 554 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 SLITRK2Q9H156 845 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 KCNK15Q9H427 330 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 PRDM13Q9H4Q3 707 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 PCDHB16Q9NRJ7 776 aa11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 AK6Q9Y3D8 172 aaKnown RBP11.09□□□□□ -0.63
SOX2-OT-209ENST00000485035 TRDV1A0A1B0GX56 115 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 SHISA3A0PJX4 238 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 ODAMA1E959 279 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 DNAJC9-AS1A6NH13 148 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 NPFFO15130 113 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 CRTAPO75718 401 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 MMP23AO75900 390 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 RBP4P02753 201 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 VSIG8P0DPA2 414 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 MGMTP16455 207 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 SAA4P35542 130 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 NEDD8Q15843 81 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 TAF9Q16594 264 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 MPV17LQ2QL34 196 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 KRBOX4Q5JUW0 171 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 SYT6Q5T7P8 510 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 TMEM158Q8WZ71 300 aa11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 MRPS24Q96EL2 167 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-209ENST00000485035 Q96M66 194 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms